Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0427 ATGGAAAAACACACCCGAGCAAATCGAAAATCTCAATCGGTCATGCCAGGTAACTGCTGTCTTCACAGATTTTCAATTTCCAAATCTATCATGGAATCCGGCGTCAGGCCGCTGAAATACCATCTGGGTCTCGACGATTCGACCGAAAGCCCGAATCCTGATTCACGCCCTAACATCAAACCTACCCCTAATGGCGAGGAATGTGGCTGGGGTTACTGCACAGAAGAACACTTGGAAGAAATTCTAATGAAAAACTTGGAGTATTTATACAATGAAGCTATATCAAAGCTTGTTACATTGGGGTATGACGAGGACACTGCTTTAAAAGCAGTTTTGCGAAACGGGCACTGTTATCATGGTGGGACAGATTCACTGACAAATATATTGCAAAACTCATTGGCTTATTTAAATAGTAATAGTGGTGGTGATAATGCATGTAAATGCAATTTGGATGGGTCAGAGCCTGTCTTCTCAGACTTGAGGGAGTTGGAGGAGTACTCTAGCAGTTATGGAATGGCAAACAAAATGGAAATCCCCGTGCTTCCTGAGCCAGGCGATTGTAATCCTGCTTCTTCTACAGTTGAAACTGTTAAAAATTCAGTAGGTGTGATCACCCCTTCTCTTTGTAGGCGTCATGGGAGTTGGGCATTTGCAAATAGTGGAGACTCAGATTTCCCTGCCAATGGGTTATTTTCTTGCGTTGCAGACATGACTTTACAAAGAGATGTTGAATTCCCAAAGCATTTTAATCTCTCTCCTTCTATGAAGTCATTGTTGAAAAGAAATGTGGCAGTGTTTGCTGCTGGTTTAAGGGCAAACTCAAAACAATTGCAGACAAAATCAAAAGCACGTCCTGGCAGTAGTTCTTCATCTAGTTTGGATTCTCCTCCTATACTGGGGACTAAACCTCCAGTTGAGAAGTCAGGGGATTCTCAGAATCAAAATAATCAACATGCTATGAATTCAGTTCTTAGTAGATTTAGTGATCTAAATTTTGATGAGAATTTGGAGCCTGTTGCTGAAGATCAGAAGGAAGAGGTGACTTCTACTATACTTCATCAGATTAATGATCTTGAGAAACAGGTACAGGAGCAAAAAGATTGGGCTCATCGGAAGGCAATGCAAGCTGCAAGAAAGCTAAGCAGTGATCTGACTGAGCTGAAAATGCTAAGGATGGAAAGAGAAGAGGCTCAGAGATTGAAGGAAGGGAAACAGGTCCTTGAGGACACCACTATGAAAAGACTTTCAGAGATGGAGATTGCACTGAGAAAGGCTAGCAGTCAAGTGGACCGTGCCAATGCAATAGTGAGGAGACTTGAAACTAAAAATGCAGAGATCAAAGCAGAGATGGAGGCTTCTAAATTGAGTGCTTCAGAGTCAGTCTCAGCTTGTTTGCAAGTTGCAAAAAGAGAGAAAAAGTGCTTGAAGAGGCTTCTAGTTTGGGAAAAACAGAAAGCTAAGCTACAGGAGGAGATTTCAGATGAGAAAGATAAGCTACTGGAGATGCAAAAAATGGTGGGTCGGATTAAACAATGTCAGAGAGAAGCTGAGATCAAGTGGAGGGAGGAGTTGAGGGCTAAAGAGGAATCCTCAACACTGTTAAAGGAGGAAAAGCGATTGAAGGAAGAAGTAGAGGCTAATAATAAGAGGAAGCTTGAGGCTTTGCGGTTAAAGGTAGATATAGATTTCCAGCGCCACAAGGATGATTTCCTCAGACTTGAACAGGAACTCTCACTTCTTAAAGCATCTGATCATCACCAATCAAATAGCTCACCTGCGGCTGAGTCTGAGGATGCAAAGCCCCAAAGAGAGAAAATTGCTAATCTGCTTCAAGAATTAGATGAATTGGAGGAAATTTCCAAGAAAGAAGAAAACTTTGTTAGGGAATGCATTATATGTAGGAAAGATGAAGTATCTGTTGTCTTCTTGCCGTGTGCCCATCAAGTGATGTGCGGAAGTATTGATGATGATGTTGATGATCTCATACGTTTGCGCGACAAGAAAAGATCCACAGCTTCTGGATTTGATCGTGCATGA 2037 0.4197 MEKHTRANRKSQSVMPGNCCLHRFSISKSIMESGVRPLKYHLGLDDSTESPNPDSRPNIKPTPNGEECGWGYCTEEHLEEILMKNLEYLYNEAISKLVTLGYDEDTALKAVLRNGHCYHGGTDSLTNILQNSLAYLNSNSGGDNACKCNLDGSEPVFSDLRELEEYSSSYGMANKMEIPVLPEPGDCNPASSTVETVKNSVGVITPSLCRRHGSWAFANSGDSDFPANGLFSCVADMTLQRDVEFPKHFNLSPSMKSLLKRNVAVFAAGLRANSKQLQTKSKARPGSSSSSSLDSPPILGTKPPVEKSGDSQNQNNQHAMNSVLSRFSDLNFDENLEPVAEDQKEEVTSTILHQINDLEKQVQEQKDWAHRKAMQAARKLSSDLTELKMLRMEREEAQRLKEGKQVLEDTTMKRLSEMEIALRKASSQVDRANAIVRRLETKNAEIKAEMEASKLSASESVSACLQVAKREKKCLKRLLVWEKQKAKLQEEISDEKDKLLEMQKMVGRIKQCQREAEIKWREELRAKEESSTLLKEEKRLKEEVEANNKRKLEALRLKVDIDFQRHKDDFLRLEQELSLLKASDHHQSNSSPAAESEDAKPQREKIANLLQELDELEEISKKEENFVRECIICRKDEVSVVFLPCAHQVMCGSIDDDVDDLIRLRDKKRSTASGFDRA 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0427 678 Coils Coil 478 505 - -
Lele51g0427 678 MobiDBLite consensus disorder prediction 42 63 - -
Lele51g0427 678 MobiDBLite consensus disorder prediction 275 297 - -
Lele51g0427 678 Coils Coil 390 410 - -
Lele51g0427 678 MobiDBLite consensus disorder prediction 582 602 - -
Lele51g0427 678 Coils Coil 527 554 - -
Lele51g0427 678 MobiDBLite consensus disorder prediction 275 316 - -
Lele51g0427 678 PANTHER OS05G0141500 PROTEIN 199 653 IPR046934 -
Lele51g0427 678 Coils Coil 599 626 - -
Lele51g0427 678 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 603 656 IPR013083 -
Lele51g0427 678 Coils Coil 415 456 - -
Lele51g0427 678 MobiDBLite consensus disorder prediction 582 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0427 Lele-ChrLele51 2462470 2467478 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0427 51 2462470 2467478 Lele55g1231 55 18878555 18880553 CCT
Lele53g0264 53 2180479 2184092 Lele51g0427 51 2462470 2467478 CCT
Lele54g0267 54 2251463 2254345 Lele51g0427 51 2462470 2467478 CCT
Lele55g1223 55 18820784 18824421 Lele51g0427 51 2462470 2467478 CCT
Lele56g1170 56 15172523 15185089 Lele51g0427 51 2462470 2467478 CCT
Lele49g0416 49 2415567 2418667 Lele51g0427 51 2462470 2467478 hybridization
Lele50g0445 50 2545717 2548717 Lele51g0427 51 2462470 2467478 hybridization