Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele51g0417 | ATGTCTGTAACACAAACCATAGCTCCTCCAGAGATTGTTGCCCTTGCGTCGTCGTCGTCCATGACCCAAGACCCTCCAAATCACCCGACAAATTCTAACGCCTTGATGTCGTGGAACCCTGAGGAAGATGACTCATGGGAGGTCAGAGCTTTTGCGGAAGATACACGAAATGTCATGGGCACCACTTGGCCTCCCAGGTCCTACAACTGCACTTTCTGCAGAAGGGAGTTCCGTTCCGCCCAAGCTCTCGGCGGCCACATGAACGTCCACCGCCGTGACCGGGCTCGCCTCCACCAACTCCACCCCAACTCTAATTCCTTCATAATCCCATCACCACAAGACCTTGTTCCTAGTAATGGATTGTGCCTTCTCTATCGTTTACCAACAGCCCCTAATAATCCCACCTTTGCCTTCGCTAACAGTACTGCTCCTACTGTCACCGGTCCGAATGCATGTGGAGAATCAACTTCCACGATTCTCTCCGTCTCGCCTTATCCGGCGAACAAGTTCGATTTTAATTCGGTGCTACGATCTGGCTGTAATATTTCGTCTTACTCTAATAACTCCACCAAAGTGGAACTGCCCACCACCAAATCCTCCAATGATGGCCACGAAGAGCTTGATCTTGAGCTCCGGCTAGGCCACAGGCCAACGCCAACCTGA | 663 | 0.5173 | MSVTQTIAPPEIVALASSSSMTQDPPNHPTNSNALMSWNPEEDDSWEVRAFAEDTRNVMGTTWPPRSYNCTFCRREFRSAQALGGHMNVHRRDRARLHQLHPNSNSFIIPSPQDLVPSNGLCLLYRLPTAPNNPTFAFANSTAPTVTGPNACGESTSTILSVSPYPANKFDFNSVLRSGCNISSYSNNSTKVELPTTKSSNDGHEELDLELRLGHRPTPT | 220 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele51g0417 | 220 | SUPERFAMILY | beta-beta-alpha zinc fingers | 65 | 95 | IPR036236 | - | |
Lele51g0417 | 220 | MobiDBLite | consensus disorder prediction | 189 | 208 | - | - | |
Lele51g0417 | 220 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 68 | 95 | IPR013087 | - | |
Lele51g0417 | 220 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 70 | 90 | IPR013087 | - | |
Lele51g0417 | 220 | Gene3D | Classic Zinc Finger | 58 | 107 | - | - | |
Lele51g0417 | 220 | Pfam | C2H2-type zinc finger | 68 | 92 | - | - | |
Lele51g0417 | 220 | PANTHER | OS07G0101800 PROTEIN | 41 | 217 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele51g0417 | Lele-ChrLele51 | 2404795 | 2405457 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele51g0417 | 31 | 217 | C2H2 Transcription Factor Family | AT4G17810 | 41.919 | 6.42e-32 | 112 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Lele51g0417 | zf-C2H2_6 | 1.4e-06 | CL0361 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele51g0417 | 51 | 2404795 | 2405457 | Lele51g0417 | 51 | 2404795 | 2405457 | ECH | |
Lele49g0408 | 49 | 2364700 | 2365371 | Lele51g0417 | 51 | 2404795 | 2405457 | hybridization | |
Lele50g0438 | 50 | 2496917 | 2497591 | Lele51g0417 | 51 | 2404795 | 2405457 | hybridization |