Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0412 ATGCTAAGAATATCAGTGCCTCTCGCTGGTGCTTTTTCGGATCCGAGCAAGTTCGAGCAGTACCCGGTGGATGGTATGGGGTACGAGGTTGATGACTTTCAGGATTTGTCTGGATACGGCGACAGTTACTCATGTTTCGACTCCAAAAGAAGCCGTGACGATTGGTTCCCAGTGGAGAGTCCAGAATCTGTTGCCCAACAGAGACCAACCAAGCAACCTAAGAGCACCAACACCACTAGCTGGACCTCTTGCACCCCTACAGCAATGGCTGACTCCATCATCCCTTCCAACCATTCTGCTTCGAATTCCACATTCCAAATCATTTCTTTTGACAACTCTAATTCTTCTCAAGACGTCGCTTCTCACCAATTTTACAGCTTGGATTCTAGTACTCTTGTCAAGCCTAAAACCGAGACTACTTTCTCTTCTGACAACGTAGATTTCCGTGCTCCCTTCCCCATTTCTAAACTCATCTATGACAGAAGAACTGATTCTTTTTTTCTCCCACATGAAAAGAAAACCGCCACCATTACCAGAAATCACATCCAAGCTCAAGATCACGTCTTGGCCGAAAGAAAACGAAGGGAGAAGCTCACCCAGAGGTCTGTTCTCTATTCCGACGATGATGGCTCCTCCTCCGATAAAAATTCCAACAGCCGTTCGTACCAGCCACTGCCCGAAATCGAAGCAAGAGTTTCGGGCAAGGAGAGTAGCAGCTTCTTGCCGTTCGGGGATGCCACTCTTGATATTACTATTGTTGCTCAGATGAACAAGGAAGAGTGCGTGACAGCAAAAGATATAATAAGAAGCCTGAGGCAGGGTCTGAGGCACTTAAATTGA 840 0.4679 MLRISVPLAGAFSDPSKFEQYPVDGMGYEVDDFQDLSGYGDSYSCFDSKRSRDDWFPVESPESVAQQRPTKQPKSTNTTSWTSCTPTAMADSIIPSNHSASNSTFQIISFDNSNSSQDVASHQFYSLDSSTLVKPKTETTFSSDNVDFRAPFPISKLIYDRRTDSFFLPHEKKTATITRNHIQAQDHVLAERKRREKLTQRSVLYSDDDGSSSDKNSNSRSYQPLPEIEARVSGKESSSFLPFGDATLDITIVAQMNKEECVTAKDIIRSLRQGLRHLN 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0412 279 MobiDBLite consensus disorder prediction 204 224 - -
Lele51g0412 279 MobiDBLite consensus disorder prediction 199 226 - -
Lele51g0412 279 PANTHER BHLH TRANSCRIPTION FACTOR 62 201 - -
Lele51g0412 279 MobiDBLite consensus disorder prediction 50 82 - -
Lele51g0412 279 MobiDBLite consensus disorder prediction 63 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0412 Lele-ChrLele51 2379193 2380656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0412 157 206 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 46.667 4.65e-07 48.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0412 51 2379193 2380656 Lele53g0243 53 2015061 2016371 CCT
Lele51g0412 51 2379193 2380656 Lele54g0249 54 2091292 2092448 CCT
Lele51g0412 51 2379193 2380656 Lele55g1241 55 18979808 18980969 CCT
Lele51g0412 51 2379193 2380656 Lele56g1189 56 15357304 15358465 CCT
Lele49g0403 49 2338478 2339860 Lele51g0412 51 2379193 2380656 hybridization
Lele50g0431 50 2452972 2454245 Lele51g0412 51 2379193 2380656 hybridization