Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0398 ATGGGGAGGGCTCCTTGCTGTGACAAAGCCAACGTGAAGAAAGGCCCATGGTCCCCTGAGGAAGACGCCAAGCTCAAGGCCTATATTGAGCAGAACGGCACCGGCGGCAACTGGATTGCCTTGCCCCAAAAGATAGGGGTTAATACAGGCCTCAAGAGATGTGGGAAAAGCTGTCGCCTACGATGGTTGAATTATCTTCGCCCAAACATCAAGCATGGGGGTTTCTCGGAGGAAGAAGACAACATAATCTGCAGCCTCTATGTTACTATTGGAAGCAGGTGGTCAATAATAGCATCACAATTACCAGGGAGAACAGATAATGATATAAAGAACTACTGGAACACTCGGTTGAGGAAGAAGCTGCTGGGTACGCAGCGCAAGGAACAACAGGCCCAAGCTCGCCCCAAGCTAGTCATGAAGAACGAAACTGAACATCTGGTGATGACACATGTGACCCAAAATCCCACCTGGCCAGCCCACCTGTGCGTTCCAACATCTCAACCATATGATCCCAACCACGGCGACTTGCCAAATAAAGTGGAGGGAACATTCTCTCAGAATCACCAGCAATCATACTCAGACACACTTTTCCATACCATAAATTCCTACTACCAACTTCTCCAACCAGAGCAGCACCAATACCAAACCTCAATAAATTCGGCAACAGCACCGCCGGTGAATAATAGTAGTAGCAGTTGTCAGTCGTCCAACATTTTCGAAGGCTTTGAAAGCTTCGCTGATGATTATTGGGATTGGAGCGAGTTGGCGAGCATGAGACCTCAACAACAACAACAACTAGATGATGCGACGTTGCAGGGTAATTACTATGGAACGGGAAGCAGCGGTGCAGCTTCAACAGAAAGCACAAGCTGGGGTGACATCAGCTCTCACCTGCAGGTTTACTCTCCTCAGCTGGTTTCTGGATACGAAGGTGTCCAACAAGGAGCGCCTCACGATATCGCTACCTACTTCGGAGTGCAATAG 984 0.4898 MGRAPCCDKANVKKGPWSPEEDAKLKAYIEQNGTGGNWIALPQKIGVNTGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVTIGSRWSIIASQLPGRTDNDIKNYWNTRLRKKLLGTQRKEQQAQARPKLVMKNETEHLVMTHVTQNPTWPAHLCVPTSQPYDPNHGDLPNKVEGTFSQNHQQSYSDTLFHTINSYYQLLQPEQHQYQTSINSATAPPVNNSSSSCQSSNIFEGFESFADDYWDWSELASMRPQQQQQLDDATLQGNYYGTGSSGAASTESTSWGDISSHLQVYSPQLVSGYEGVQQGAPHDIATYFGVQ 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0398 327 FunFam Transcription factor MYB36 74 144 - -
Lele51g0398 327 Gene3D - 74 145 - -
Lele51g0398 327 CDD SANT 75 117 IPR001005 -
Lele51g0398 327 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Lele51g0398 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 121 IPR017930 -
Lele51g0398 327 CDD SANT 16 66 IPR001005 -
Lele51g0398 327 ProSiteProfiles Myb-like domain profile. 9 66 IPR001005 -
Lele51g0398 327 Gene3D - 7 72 - -
Lele51g0398 327 Pfam Myb-like DNA-binding domain 73 115 IPR001005 -
Lele51g0398 327 Pfam Myb-like DNA-binding domain 14 66 IPR001005 -
Lele51g0398 327 PANTHER OS09G0431300 PROTEIN 1 287 - -
Lele51g0398 327 SMART sant 13 68 IPR001005 -
Lele51g0398 327 SMART sant 71 119 IPR001005 -
Lele51g0398 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Lele51g0398 327 FunFam Transcription factor RAX3 7 72 - -
Lele51g0398 327 SUPERFAMILY Homeodomain-like 11 113 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0398 Lele-ChrLele51 2295235 2296402 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0398 1 139 MYB Transcription Factor Family AT5G65790 85.000 8.06e-84 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele51g0398 Myb_DNA-binding 4.5e-12 CL0123