Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0396 ATGCCCCTTCCTCCTAATTATGGCATTTACTATGGTGGTCTTGAAGGTGAAAATGTCGGCTTCTATTCGTCCCTTCCCGTTATGCCCCTAAAATCTGATGGCTCTCTCTACCTAATGCAGTCACAGCCTCAAGGCAGCTCAACAATGGGGACCTTGAGCTTAGACAGCATGATTTTCGCCAACCAATCCTCACGACGCGAACTCAACAACCCAAACCATCTGAACCGCGTCGAACAAGGGCAAGACGTTCAGGCTCAGCCTTTCGCATCGTACTATTCTGGCTTCAGAAGTCATGAAATGATGTTAGAAGGGCCCAAGCAGAATGAGGTTTCAGACTGTAATGTGCAGGTCCCGAGTATTGGAGAGGAGGGAGTTTCTGGAATGAAGAGCTGGGGAATAAGAGTCAACCCGGCGGGTCATGCACCGGAGTCGGAGATGGTGGTTAGCGTGAAGGATAACAACGGTGGCGAATCTGGATCGATAGGGTCAATGGCGTATGGCGATTTGCAGTCACTGAGCTTGTCCATGAGTCCTGGCTCACAATCAAGCTGCGTCACAAGTTCACAGAGAGCATCACCTTCTGTCATTGATTCTGTTGGTGTGGATACAAAGAAAAGAGGGCCTGAAAAGTTTGACCATAAGCAAATTATTCACCGGAAATCCATAGATACCTTCGGTCAAAGAACCTCCCAGTATAGAGGTGTAACAAGACATAGATGGACTGGTAGATATGAAGCACATCTTTGGGACAACAGTTGCAAGAAAGAGGGTCAAAGCAGGAAAGGAAGGCAAGTTTCCACCCCCACCCCCTCTTTGCAGTTGGAAAATTATCAAAATGAACTTGAGGAAATGAAGAACATGACCAGACAGGAATATGTAGCTCATTTGCGGAGGAAAAGCAGCGGATTCTCCAGAGGTGCTTCCATGTACAGAGGAGTAACAAGACATCATCAACATGGGCGGTGGCAAGCTCGAATCGGCAGAGTGGCTGGAAACAAGGATCTATATCTTGGAACCTTCAGTACCCAAGAGGAAGCAGCTGAGGCATATGACATTGCAGCTATAAAGTTCCGTGGAGTAAATGCGGTGACCAACTTTGATATAACAAGATATGATGTGGACAAAATCATGGCTAGCAGTAACCTTCTTAGTGGTGAACAAGCCAGGCGGAACAGAGACATCGATGGTGGTAACGATCGGGCTATTATTCCTATAGGCACAGCATATGTTGAAAACCAGGATGCGATTTCGATGCGCAAGGGCTTGGAGGGCCAATCGTCGGAGCGGAAGCTGGGAACTCATATCTTAAATCGTTCTCAATGGATGATAGAACTTGACCAAAATCCACCAAGAATTGAGACTTATAGAACTCATCAGTCCTTCTCAATGCCTTTAGATAACATGATCCATCAAGTAGATGACTCAACCAAGATGGGAACGCACGTCTCAAATCCTTCGTCTGAGTGCGAAATCAGATCCCGTCAAAAGTGCTTTAGCGATCTGATTAATGACTCTGTGGCCCGTGCCGTTTTACATTTTGCCTTCTGTGCTACGGAAGGCTATCCTGTTGGAAAACCTTTCACATCTTCCAAAGCACTCTGCATTTCTAATCATGATGTTGGTCATCAAATTGGCAATCTTGCCCCATACCCGCGTGAAACCCATGAAACTCGTTATGTGCGCGTGAAAAAAAAAAAGCAACGTGATAAGCTTGTGGTCAAAGAGACATCCTTTGTAGAACAGGCAGCAACAACAGTGGGGAAGATTGGCAATACTTCAATTAAGATACGTACATCTCTGTCTTTCAACTCTCCGACCCTTCCCTGCGTTTTGGATGATGAACAAGGAAGAATGGGCCAGGCCGCTAAGCCCACGGCCCAGTGTCAAGGCCCTAGTGCTTGCCGTAATGACCGAGAAATAGAATTCAGGAATACAATTAAAAGTCCGGCTGAAAAATGGCACAAAAAGGCCATAACAAAAGAGAGGGGAAAGAAAGGGGTGGGGGTCGGGTCAGGATGGAGAGGCGTGGGCAAGTGGGAGGCAGAGGAGGATAAAGGAAGGAATTTGAAATTAAAGTGTGCTACAGCGCGTTCGGTCTCCACTCTCCCTTCACCTTCTCTGCCTTCTACTTCGTCGAAACTGCGCCTCCCTTCCACTTGGACTCCTTATCTCCCCTATTCGCGGTCATCTAAGCAGAATAAGGAGGACACGCATGAAGTCGTATCAATTTTCAACAGGGAATCAACCAGCCCCCCTAACTTGTTCGTTGTTCAACCCCGTCTTCGTCCCGATAAATTTTTACAGGCTAAGCTCCACGAAGCTCTTTGTCTTGCTAACTCTCTGGAAGAGCAGCGAGATGGGTATTTTGACACAGACTTCTTTGATAAGGCTTTGCCTCCCCATATCATTGTTCAAAACCCATCCATGAAATGTCACAAGGCTCGCGCAGCTATGGGCTTTAGGGATGAGAAGAGGGCGGTGTACCGAAATTTGAAACAATGCTCAGGTTATGAGAGCTTTGCGGGAGCTTTGAAATTAGTTGTGGATTCTCTTTGTCAAATTGCCATTCCACCGTAG 2577 0.4688 MPLPPNYGIYYGGLEGENVGFYSSLPVMPLKSDGSLYLMQSQPQGSSTMGTLSLDSMIFANQSSRRELNNPNHLNRVEQGQDVQAQPFASYYSGFRSHEMMLEGPKQNEVSDCNVQVPSIGEEGVSGMKSWGIRVNPAGHAPESEMVVSVKDNNGGESGSIGSMAYGDLQSLSLSMSPGSQSSCVTSSQRASPSVIDSVGVDTKKRGPEKFDHKQIIHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQVSTPTPSLQLENYQNELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDITRYDVDKIMASSNLLSGEQARRNRDIDGGNDRAIIPIGTAYVENQDAISMRKGLEGQSSERKLGTHILNRSQWMIELDQNPPRIETYRTHQSFSMPLDNMIHQVDDSTKMGTHVSNPSSECEIRSRQKCFSDLINDSVARAVLHFAFCATEGYPVGKPFTSSKALCISNHDVGHQIGNLAPYPRETHETRYVRVKKKKQRDKLVVKETSFVEQAATTVGKIGNTSIKIRTSLSFNSPTLPCVLDDEQGRMGQAAKPTAQCQGPSACRNDREIEFRNTIKSPAEKWHKKAITKERGKKGVGVGSGWRGVGKWEAEEDKGRNLKLKCATARSVSTLPSPSLPSTSSKLRLPSTWTPYLPYSRSSKQNKEDTHEVVSIFNRESTSPPNLFVVQPRLRPDKFLQAKLHEALCLANSLEEQRDGYFDTDFFDKALPPHIIVQNPSMKCHKARAAMGFRDEKRAVYRNLKQCSGYESFAGALKLVVDSLCQIAIPP 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0396 858 PRINTS Ethylene responsive element binding protein signature 349 369 IPR001471 GO:0003700|GO:0006355
Lele51g0396 858 PRINTS Ethylene responsive element binding protein signature 232 243 IPR001471 GO:0003700|GO:0006355
Lele51g0396 858 ProSiteProfiles AP2/ERF domain profile. 309 367 IPR001471 GO:0003700|GO:0006355
Lele51g0396 858 SUPERFAMILY DNA-binding domain 308 368 IPR016177 GO:0003677
Lele51g0396 858 SMART rav1_2 309 373 IPR001471 GO:0003700|GO:0006355
Lele51g0396 858 FunFam AP2-like ethylene-responsive transcription factor 308 369 - -
Lele51g0396 858 Pfam AP2 domain 310 359 IPR001471 GO:0003700|GO:0006355
Lele51g0396 858 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 184 392 - -
Lele51g0396 858 Coils Coil 274 294 - -
Lele51g0396 858 CDD AP2 308 369 IPR001471 GO:0003700|GO:0006355
Lele51g0396 858 Gene3D AP2/ERF domain 230 282 IPR036955 GO:0003700|GO:0006355
Lele51g0396 858 Gene3D AP2/ERF domain 309 369 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0396 Lele-ChrLele51 2267964 2275324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0396 6 393 AP2-EREBP Transcription Factor Family AT4G37750 49.775 2.18e-110 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele51g0396 AP2 1.5e-09 CL0081