Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0375 ATGAGGAAGAAACACAGGAAATCAGCAACTTTACGTTGCCATGGAGGGAACAGATGCTCAACCTATGTTGTGATATGGAGCTTGGTAGGTTTTCTTCTGTTGCTTAATTGGTTTTCCAATGTTCGCCACAAAGCCACAGAGTATGGAAAGTTCCAATTGCTTGGAAGTCATCATCCTCTATTTCGTGAACTTCAACAAGTGGATGAGGAGAACATTCAAATTCCCCCACCCAGAGGAAAGAGGTCTCCTCGGGCAGAAAAACGCAGACCTAAGCGGCCAACCACCCTGATAGATGAATTCCTCAATGAAGAATCTCAACTGAGACACATATTCTTTCCTGGGCAGGAGAATGCTATAGATCCCATGAAGGATTATGTAAATGATAGTTATTACTACCATCCTGGAAGAATTTGGTTGGACACTGATGGAAATCCCATTCAAGCCCATGGAGGGGGCATTCTGTTTGATAAAGTATCAAGGACATACTATTGGTATGGTGAGTATAAAGATGGGCCCACCTATGAATCTCCCCAGAATGGAATTGCACGGGTGGACATTATAGGAGTTGGTTGCTATTCCTCCAAGGATTTGTGGACTTGGAAAAATGGGGGAATCGTCTTGGCAGCTCAGGAAACAGATGAAACCCATGATCTGCACAAGTCCAATGTACTGGAGAGGCCGAAAGTGATTTACAATGAGAAGACTGGAAAATATGTGATGTGGATGCATATTGATGATGCCAACTATACCAAGGCAGCTGTTGGGGTAGCAATCAGTGATACTCCTGATGGTCCTTTTGATTATCTTGGTAGCCAAAGACCGCATGGATGTGAAAGCAGGGATATGACGATTTTCAAGGATGATGATGGAGTGGCGTATCTGATATATTCCTCTGAGGACAATAGTGAACTGCACATAGGACCCCTGACTGAAGATTATCTCAATGTGACATCTGTCATGAGAAGGATTCTTGTTGGACAACGCAGGGAAGCGCCAGCCCTGTTCAAGCACCGTGGCACATATTACATGATTACATCAGGCTGCACTGGATGGGCCCCAAATGAGGCACTGGCTCATGCAGCTGAGTCAATCCTGGGGCCTTGGGAGACTTTGGGAAATCCATGCATTGGAGGAAACAAAGTGTTTCAAGAAACAACCTTCTTTGCTCAGAGCACTTTTGTTTTCCCCCTACCTGGGCTCCCAGGTTCATTCATTTTCATTGCGGATCGATGGAAATCTGCTGACTTAAGGGACTCGAGATATGTGTGGTTGCCTTTGATAGTGGCAGGACCTGCCGATCGGCCTCTGGAGTTCAATTTTGAATTCCCATTGTGGTCAAGAGTTTCTATCTATTGGCATAGAAAATGGAGACTGTCTCGGGTGGGTTGGGTTTAG 1395 0.4523 MRKKHRKSATLRCHGGNRCSTYVVIWSLVGFLLLLNWFSNVRHKATEYGKFQLLGSHHPLFRELQQVDEENIQIPPPRGKRSPRAEKRRPKRPTTLIDEFLNEESQLRHIFFPGQENAIDPMKDYVNDSYYYHPGRIWLDTDGNPIQAHGGGILFDKVSRTYYWYGEYKDGPTYESPQNGIARVDIIGVGCYSSKDLWTWKNGGIVLAAQETDETHDLHKSNVLERPKVIYNEKTGKYVMWMHIDDANYTKAAVGVAISDTPDGPFDYLGSQRPHGCESRDMTIFKDDDGVAYLIYSSEDNSELHIGPLTEDYLNVTSVMRRILVGQRREAPALFKHRGTYYMITSGCTGWAPNEALAHAAESILGPWETLGNPCIGGNKVFQETTFFAQSTFVFPLPGLPGSFIFIADRWKSADLRDSRYVWLPLIVAGPADRPLEFNFEFPLWSRVSIYWHRKWRLSRVGWV 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0375 464 PANTHER GLYCOSYL HYDROLASE 43 FAMILY MEMBER 24 460 - -
Lele51g0375 464 SUPERFAMILY Arabinanase/levansucrase/invertase 144 428 IPR023296 -
Lele51g0375 464 CDD GH43_CtGH43-like 146 426 - -
Lele51g0375 464 Gene3D Glycosyl hydrolase domain; family 43 116 441 IPR023296 -
Lele51g0375 464 MobiDBLite consensus disorder prediction 67 93 - -
Lele51g0375 464 Pfam Glycosyl hydrolases family 43 187 371 IPR006710 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0375 Lele-ChrLele51 2155181 2158460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0375 1 458 Glycoside Hydrolase AT3G49880 71.800 0.0 676
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0375 51 2155181 2158460 Lele53g0200 53 1674113 1675642 CCT
Lele51g0375 51 2155181 2158460 Lele54g0204 54 1756688 1758223 CCT
Lele51g0375 51 2155181 2158460 Lele55g1285 55 19329123 19330844 CCT
Lele51g0375 51 2155181 2158460 Lele56g1234 56 15683665 15685179 CCT
Lele51g0375 51 2155181 2158460 Lele51g0375 51 2155181 2158460 ECH
Lele49g0361 49 2126847 2133024 Lele51g0375 51 2155181 2158460 hybridization