Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0369 ATGCGATCACCTTTAGCTTTCTTGCCTATGTCGGAGAAGAGGCCTGGTCCTTTGGTCATCTTCGCAGGACTTGCAAGCTCACGCAGCTATGAAAGAAAGAGATGTGACGGGAAACAGGGATCTGCTAGATTCCCTGAGGATGATGAAAGACCGAAGCAGGCTGTGGCGAGGCAGATGGCGGAAGGGACTCTAAGGATACAATACCGGAAGGAAAAATTAGAACGCAAAGAAGATAAGAGCAAGGCAAACGATTACTGGCAGGCGATGGATCCTTTTTCATTAGATGATCGCTTTACAAAGGTGCGATCTAAGAACACGTCAAGAGAAGCCCTTGAAAAATGGAGGAACCTATGCGGGGTAGTCAAGAACCCCAAACGACGCTTTCGTTTCACAGCCAATCTCTCCAAGCGAGACGAAGCGGCTGCTATGCGTCGTGCCAATCAGGAGAAGCTGAGGGTTGCCGTTCTAGTTTCCAAAGCAGCACTTCAATTTATTCAAGGTGTGCCACAAAGTGATTATGTTGTACCCGAGGATGTTAAAGCAGAAGGTTTTCAGATATGTGCTGAAGAATTGGGGTCTATTGTTGAAGGTCATGATTCAAAGAAGCTGAAATATCATGGCGGGGTTAGTGGTCTTGCAGGCAAGCTTTCAGTATCAATCAATGATGGGCTTAGCAATGACACTGATCTTCTTAACAAGAGACAAAAGGTTTATGGAATCAACAAATTTACCGAGGCTGAGTCTCGGAGTTTCTGGGTTTTTGTTTGGGAAGCCCTTCAAGACATGACTCTCATGATCCTTGGAGTATGTGCTCTTGTGTCTCTCATAGTTGGCATAGCAATGGAAGGATGGCCCCATGGGGCCCATGATGGTCTTGGAATTGTTGCAAGTATCTTACTGGTTGTCTTTGTGACAGCAACAAGTGATTACCGACAATCATTACAATTCAAGGACTTGGACAAGGAGAAGAAGAAGATTGCCATTCAGATCACAAGAAATGGTTATAGGCAGAAAATGTCAATATATGATTTACTTCCCGGTGACATTGTGCATCTTGCTATAGGAGACCAAGTCCCAGCAGATGGCCTATTTCTTTCAGGATTCTCTGTGTTGATCGATGAGTCGAGTTTAACTGGAGAGAGTGAACCAGTGATGGTGAGTTCTGAAAATCCATTTCTTCTTTCAGGTACTAAGATCAAAGATGGCTCTTGCAAAATGATGGTTACCACTGTTGGGATGAGGACTCAATGGGGTAAGTTGATGGAAACTCTCAGTGAAGGAGGAGATGATGAAACCCCATTGCAGGTAAAGTTAAATGGAGTGGCAACCATCATCGGGAAGATAGGCCTGTTCTTTGCTGTAGTTACTTTTGCAGTTTTAGTGCAAGGCCTTTTGAACCGTAAGTTCCAAGAGGGAAGCCTCTTGACCTGGTCTGGAGATGAAGCGTTGCACACTTTGGAATTCTTTGCTGTTGCCGTTACGATCGTCGTTGTTGCTGTTCCAGAGGGGCTGCCATTAGCTGTCACATTGAGCCTTGCTTTTGCTATGAAGAAGATGATGAATGACAAAGCCCTTGTCCGAAACTTAGCAGCTTGTGAAACCATGGGATCAGCCACAACAATATGTAGTGACAAGACTGGAACATTAACTACCAACCGCATGACAGTTGTGAAAACATGCATTTGTATGAATAGGAAGGAAGTGAGCAATGATGCTTCTTCTACCTTACCTTCTGATCTCCCTGATTCTGCTGTGAAACTGCTGCTACAATCAATATTTCTTAACACGGGAGGAGAAGTCGTGGTCACTGAAAATGGAAAACGCGAGGTGTTGGGGACACCAACAGATACTGCAATATTGGAGTATGGGTTATCTCTTGGTGGGGACTTTCAGGCAGAGAGAAATGCATGCAAGGTTGTTAAAGTTGAGCCATTTAACTCTGTAAAGAAAAGGATGGGTGTGGTTGTGGAGCTTTCTGAGGGTGAAGGCTTTAGAGCCCACACTAAAGGAGCTTCTGAAATAATTCTGGCTGCCTGTGACAAGTTTATCAATTCCAAAGGTGAGGTTGTTCCACTTGATGAAGAATCTAGGAACCATCTAAGGGTGACAATAAACCAATTTGCAAGTGAGGCGCTTAGAACACTATGCATTGCCTACATGGACATGGAAAAGGGATTCTCAGCTGAAGACCCCATTCCAGTTTCTGGGTATACTTGTATTGGAATTGTTGGTATTAAGGATCCTGTTCGTCCTGGGGTTAAAGAATCAGTTGCAGTTTGTCGTTCGGCTGGGATAACAGTAAGGATGGTTACGGGTGACAATATTGATACTGCAAAGGCTATAGCTAGAGAATGTGGGATTTTAACAGATGATGGTATAGCAATTGAAGGTCCAGAATTTAGAGAGAAGAGTCAAGAGGAACTGTTCAAACTGATCCCAAAAATTCAGGTTATGGCTCGTTCTTCACCTATGGACAAGCATACATTGGTGAAACACCTCCGTACCACATTTCGGGAAGTCGTAGCTGTGACTGGTGATGGAACAAATGATGCCCCAGCCCTTCATGAAGCTGACATTGGACTTGCAATGGGCATTGCTGGAACTGAGGTTGCTAAAGAAAGTGCTGATGTCATCATTCTGGATGATAATTTTTCCACAATCGTGACAGTGGCAAAATGGGGACGTTCAGTTTACATAAACATTCAGAAATTTGTACAGTTCCAGCTCACTGTTAATGTGGTTGCATTACTAGTGAACTTCACTTCAGCTTGCTGGACAGGTAGTGCACCTCTGACAGCTGTACAACTACTGTGGGTGAACATGATAATGGACACGCTAGGAGCACTGGCACTTGCAACTGAACCTCCAAACGATGAATTGATGAAGCGGTCACCGGTAGGAAGGACCGGTAATTTCATTAGCAAGATCATGTGGAGGAACATCTTAGGGCAATCATTGTATCAGATTATGGTGATATGGTTTCTTCAGACCAGTGGAAAATTGTATTTTAACCTCAATGGCCCTGATGCTGATCTGATCCTAAACACACTAATTTTCAACGCATTTGTCTTCTGTCAGGTTTTTAATGAAATAAGCTCACGTGAGATGGAGAAAATAAATGTTTTCAAAGGCATATTGAATAACTATGTTTTCGTAGGCGTCATCAGTTGCACTGTTATCTTTCAAGTCATAATTGTTGAGTTCTTGGGAACCTTTGCAAACACCACGCCTCTCACTCTGCAGCAATGGGTCTCAAGCATATTCATCGGAATTTTGGGCATGCCAATTGCAGCTGTAATAAAGATGCTCTCTGTCTGA 3318 0.4373 MRSPLAFLPMSEKRPGPLVIFAGLASSRSYERKRCDGKQGSARFPEDDERPKQAVARQMAEGTLRIQYRKEKLERKEDKSKANDYWQAMDPFSLDDRFTKVRSKNTSREALEKWRNLCGVVKNPKRRFRFTANLSKRDEAAAMRRANQEKLRVAVLVSKAALQFIQGVPQSDYVVPEDVKAEGFQICAEELGSIVEGHDSKKLKYHGGVSGLAGKLSVSINDGLSNDTDLLNKRQKVYGINKFTEAESRSFWVFVWEALQDMTLMILGVCALVSLIVGIAMEGWPHGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKIAIQITRNGYRQKMSIYDLLPGDIVHLAIGDQVPADGLFLSGFSVLIDESSLTGESEPVMVSSENPFLLSGTKIKDGSCKMMVTTVGMRTQWGKLMETLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVLVQGLLNRKFQEGSLLTWSGDEALHTLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNRMTVVKTCICMNRKEVSNDASSTLPSDLPDSAVKLLLQSIFLNTGGEVVVTENGKREVLGTPTDTAILEYGLSLGGDFQAERNACKVVKVEPFNSVKKRMGVVVELSEGEGFRAHTKGASEIILAACDKFINSKGEVVPLDEESRNHLRVTINQFASEALRTLCIAYMDMEKGFSAEDPIPVSGYTCIGIVGIKDPVRPGVKESVAVCRSAGITVRMVTGDNIDTAKAIARECGILTDDGIAIEGPEFREKSQEELFKLIPKIQVMARSSPMDKHTLVKHLRTTFREVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALLVNFTSACWTGSAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRSPVGRTGNFISKIMWRNILGQSLYQIMVIWFLQTSGKLYFNLNGPDADLILNTLIFNAFVFCQVFNEISSREMEKINVFKGILNNYVFVGVISCTVIFQVIIVEFLGTFANTTPLTLQQWVSSIFIGILGMPIAAVIKMLSV 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0369 1105 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 294 573 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele51g0369 1105 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 636 789 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele51g0369 1105 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 814 925 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele51g0369 1105 Gene3D - 552 748 IPR023299 GO:0000166
Lele51g0369 1105 Pfam Cation transport ATPase (P-type) 603 681 - -
Lele51g0369 1105 PRINTS P-type cation-transporting ATPase superfamily signature 763 773 - -
Lele51g0369 1105 PRINTS P-type cation-transporting ATPase superfamily signature 373 387 - -
Lele51g0369 1105 PRINTS P-type cation-transporting ATPase superfamily signature 741 752 - -
Lele51g0369 1105 PRINTS P-type cation-transporting ATPase superfamily signature 542 556 - -
Lele51g0369 1105 PRINTS P-type cation-transporting ATPase superfamily signature 868 880 - -
Lele51g0369 1105 PRINTS P-type cation-transporting ATPase superfamily signature 844 863 - -
Lele51g0369 1105 FunFam Calcium-transporting ATPase 106 166 - -
Lele51g0369 1105 SUPERFAMILY Calcium ATPase, transduction domain A 329 423 IPR008250 -
Lele51g0369 1105 SUPERFAMILY HAD-like 540 949 IPR036412 -
Lele51g0369 1105 SFLD C1.7: P-type atpase like 524 896 - -
Lele51g0369 1105 Pfam Cation transporter/ATPase, N-terminus 205 274 IPR004014 -
Lele51g0369 1105 Gene3D - 106 166 - -
Lele51g0369 1105 Pfam Cation transporting ATPase, C-terminus 929 1103 IPR006068 -
Lele51g0369 1105 Gene3D - 230 425 - -
Lele51g0369 1105 SUPERFAMILY Calcium ATPase, transmembrane domain M 205 1103 IPR023298 -
Lele51g0369 1105 FunFam Calcium-transporting ATPase 552 748 - -
Lele51g0369 1105 FunFam Calcium-transporting ATPase 861 1105 - -
Lele51g0369 1105 MobiDBLite consensus disorder prediction 32 51 - -
Lele51g0369 1105 PANTHER CATION TRANSPORTING ATPASE 148 1104 - -
Lele51g0369 1105 Gene3D - 257 1102 - -
Lele51g0369 1105 SFLD p-type atpase 524 896 IPR044492 -
Lele51g0369 1105 PRINTS H+-transporting ATPase (proton pump) signature 876 901 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele51g0369 1105 PRINTS H+-transporting ATPase (proton pump) signature 844 860 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele51g0369 1105 PRINTS H+-transporting ATPase (proton pump) signature 700 718 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele51g0369 1105 ProSitePatterns E1-E2 ATPases phosphorylation site. 544 550 IPR018303 -
Lele51g0369 1105 CDD P-type_ATPase_Ca_PMCA-like 231 977 - -
Lele51g0369 1105 FunFam Calcium-transporting ATPase 305 425 - -
Lele51g0369 1105 Pfam E1-E2 ATPase 328 520 - -
Lele51g0369 1105 FunFam Calcium-transporting ATPase 737 889 - -
Lele51g0369 1105 Gene3D - 539 889 IPR023214 -
Lele51g0369 1105 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 548 753 IPR023299 GO:0000166
Lele51g0369 1105 Pfam Ca2+-ATPase N terminal autoinhibitory domain 94 139 IPR024750 GO:0005516
Lele51g0369 1105 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 199 1103 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0369 Lele-ChrLele51 2124751 2134813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0369 94 1105 Primary Pumps ATPases AT4G37640 81.621 0.0 1686