Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0362 ATGATCAACCCCTCCACTGCCCAACCGAGACCCCCCCAAAAGGCACCTCAACGTGAGTTGATTGTCAATATGCGAGAACAGTCTGGGACGGTGGTGGTGAGAGAATTCGATGCCAATAGGGACCGAGAGAGAGTGGAAGCCATGGAAAAGATATGTGAGGTCGGACCCAGTGGGAAGCTCTCCCTGTTCACCGACCTCATGGGTGATCCGACTTGCAGGGTCCGCAACTCACCTGCTTTTCTCATGCTGGTAGCCGAGATGGGCCAAGAGATCGTGGGAATGATAAGGGGCTGCATCAAAACCGTTACATGCGGAAAGAAGCTATCCAGAAATGTGAAGAACCCCTACTTGAATATCAACGACGCTGAGAACTTCCAAGCAACTCCCAGATACGTCCCTGTATACACCAAAGTCGCCTACATTTTAGGCCTCCGCGTCTCGCCTTCTCACCGGAGAAGGGGAATAGGGCTGAAGCTGGTGCACAGAATAGAGGAGTGGTTCAGAGATAATGGGGTTGAGTACTCGTATATAGCAACGGAAAACGACAATTTAGCATCCGTTAAGCTCTTCACTGACAAATGCGGATACTCCAGGTTCCGTACCCCGTCAATCCTTGTCAATCCCGTTTACGCTCACAGAGAGAAGGTCTCTCGCAAGGTTACCATCATCCCGCTCAACTCCGACGACGCCGAATCCCTCTATCGTCGTCGCTTCGCCACCACCGAATTCTTTCCCCGCGACATTGATTCCATCCTGAAAAACAAACTCAGCCTCGGGACCTTCCTCGCCGTCGCAAGTGGGTCCTACCGCGCAGAGACATGGCCCGGGTTGGATCGCTTCCTGTCGGACCCACCAGAGTCCTGGGCAGTGCTCAGCGTCTGGAACTGCAAGGAAGTCTTCACGCTCGAAGTGAGGGGCGCGTCGCGCGTGAAGCGCACCCTCGCTAAAACGACCAGAATAATGGATCGGGCCTTACCGTGGCTGAGGCTGCCGTCGATTCCGAACTTCTTCAGACCGTTCGGACTGCACTTCCTGTATGGACTCGGAGGCGAAGGCCCAGAAGCGGTGAAGATGGTGAAGGCCTTGTGTGGGTTCGCACATAACCTGGGGAAGGAACGTGGATGCGGGGTGGTGGCGACGGAAGTATCGAGCCGCGATCCCCTCAAGTTCGGGATACCACACTGGAAGATGTTGTCTTGCGATGAGGATTTATGGTGCATCAAGCGGCTCGGGGAAGACTACAGTGACGGCTCCGTGGGTGACTGGACCAAATCTCCGCCCGGATGGTCCATTTTTGTTGACCCCAGAGAGGTTTAA 1317 0.5467 MINPSTAQPRPPQKAPQRELIVNMREQSGTVVVREFDANRDRERVEAMEKICEVGPSGKLSLFTDLMGDPTCRVRNSPAFLMLVAEMGQEIVGMIRGCIKTVTCGKKLSRNVKNPYLNINDAENFQATPRYVPVYTKVAYILGLRVSPSHRRRGIGLKLVHRIEEWFRDNGVEYSYIATENDNLASVKLFTDKCGYSRFRTPSILVNPVYAHREKVSRKVTIIPLNSDDAESLYRRRFATTEFFPRDIDSILKNKLSLGTFLAVASGSYRAETWPGLDRFLSDPPESWAVLSVWNCKEVFTLEVRGASRVKRTLAKTTRIMDRALPWLRLPSIPNFFRPFGLHFLYGLGGEGPEAVKMVKALCGFAHNLGKERGCGVVATEVSSRDPLKFGIPHWKMLSCDEDLWCIKRLGEDYSDGSVGDWTKSPPGWSIFVDPREV 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0362 438 Gene3D - 63 203 - -
Lele51g0362 438 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 24 438 - -
Lele51g0362 438 FunFam Probable N-acetyltransferase HLS1-like 40 203 - -
Lele51g0362 438 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 31 216 IPR000182 GO:0016747
Lele51g0362 438 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 75 199 IPR016181 -
Lele51g0362 438 CDD NAT_SF 82 174 - -
Lele51g0362 438 Pfam Acetyltransferase (GNAT) family 81 196 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0362 Lele-ChrLele51 2079677 2081713 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele51g0362 Acetyltransf_1 2.5e-18 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0198 53 1658840 1662078 Lele51g0362 51 2079677 2081713 CCT
Lele54g0202 54 1741008 1744207 Lele51g0362 51 2079677 2081713 CCT
Lele55g1287 55 19342249 19345488 Lele51g0362 51 2079677 2081713 CCT
Lele56g1236 56 15698061 15701215 Lele51g0362 51 2079677 2081713 CCT
Lele51g0362 51 2079677 2081713 Lele51g0362 51 2079677 2081713 ECH
Lele49g0349 49 2061074 2063968 Lele51g0362 51 2079677 2081713 hybridization
Lele50g0372 50 2121020 2122675 Lele51g0362 51 2079677 2081713 hybridization