Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0336 ATGACTTTTTACAGGGAAGATGAAAAAGATGGGAAACACATCATCAATGAACATGCAGATGGTGGATCAAAGACAATGGGCCATTTCGTAGGAGAATGGTTGAGTTTAGGAGTCAAGAGGGGCATGCCTGAGGAAGTTGATCAAACTCAAAACCAAAATCTGCAGTCAAAACGTCTCAAGAATAAGTTGTTCTCATGCAATTTCTGCATGAGGAAGTTTCATAGTTCACAAGCATTAGGGGGTCACCAGAATGCACACAAGAGAGAAAGAGTAGCAGCCAGAAGGCACCAATATTCTAAGATGATAGTGATGATGATGATGATGAATACAATGGGTCTTCATGCCCATTCGCTTATGCACAAGCCAAGCAGGGAAGGGTCTGCTATGGCTGCTCCATCAAAACAAGCAATGGATTTGGATTTGGATTTGATTTGGCCAGGAAGCTTTCGGGTTAATTTACCAAAGCAAGCATCTGGTGCAAATAAGCTTGACTTAGATCTTCGTTTATGA 510 0.4176 MTFYREDEKDGKHIINEHADGGSKTMGHFVGEWLSLGVKRGMPEEVDQTQNQNLQSKRLKNKLFSCNFCMRKFHSSQALGGHQNAHKRERVAARRHQYSKMIVMMMMMNTMGLHAHSLMHKPSREGSAMAAPSKQAMDLDLDLIWPGSFRVNLPKQASGANKLDLDLRL 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0336 169 ProSiteProfiles Zinc finger C2H2 type domain profile. 64 91 IPR013087 -
Lele51g0336 169 Gene3D Classic Zinc Finger 45 114 - -
Lele51g0336 169 ProSitePatterns Zinc finger C2H2 type domain signature. 66 86 IPR013087 -
Lele51g0336 169 PANTHER ZINC FINGER PROTEIN 4-LIKE 17 169 - -
Lele51g0336 169 SUPERFAMILY beta-beta-alpha zinc fingers 60 91 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0336 Lele-ChrLele51 1917105 1917614 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0336 62 137 C2H2 Transcription Factor Family AT1G80730 39.252 1.72e-18 77.4