Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0325 ATGAATAGGGTCGCCGCAGATATGGACCGGATTAAGGGTCCATGGAGTCCGGAAGAGGACGAGGCCTTACAGAAGCTCGTCGAGAAGTATGGCCCCAGGAATTGGTCCCTCATCAGTAAGTCTTTTCGCGGTCGATCCGGTAAGTCTTGCAGGCTTCGTTGGTGCAATCAGCTCTCCCCTCAGGTCGAGCACCGAGCGTTCACGCCCGAGGAGGATGAGACCATAATCAGGGCTCATGCCCGTTTCGGTAATAAATGGGCCACCATCGCTCGCCTGCTCTCCGGCCGAACCGATAACGCCATCAAGAACCACTGGAATTCTACGTTGAAGCGCAAGTGTGCATCCATGATGATCGATGACGCCGGCGCTGTCGGTGGTTTCGATGGCAGTTTCAGCCCGCGGCCGCTTAAGAGGTCGGTCAGTGCCGGCGCCGCTGTACCCGTATCCACTGGGCTGTGCATGAACCCGTCCACGCCGGGCAGCCCGTCTGGATCGGATATAAGCGAGTCCAGTGTTCCCGTTGCGTCTTCTTCTCAAGTCTATCGACCAGTCCCGAGAACCGGTGGGGTTCTACCTCCCGTAGAAACGACGTCATCTTCCAATGACCCTCCCACGTCATTATCCCTGTCTCTTCCGGGTTTAGACTCTTCTGAAGTGTCTAATCGGCCTGCAGACCCAACACAAACTGCACCTCCGGCCAACAGTAAGCGCTTGTTATCTGTAATGGCGCCGACGCCCGCTCCGGCTCTCCCACCCGCCCCACCTCCGGCTCTGGCACCTGCTCCGATGTCGGTGTTGCCACAGCAGGTTCATTTGGTTAGGGATGATCGAAGTGGCGAGAGGGGTCCAAATCAGAATGGGTTCTTAGGTTTCAATTTCAGTGCAGAGTTGCTAGCAGTGATGCAAGACATGATAAGGAAGGAGGTGTGGAGTTATATGGCGGGGTTGGAGCAGCAGAATGGGGTGTGCTTTCAGGCAGCTGATGGATTCCGAAACGCTTCGGTGAAGCGTATTGGAATTAGCAGGATCGATTCATGA 1038 0.5588 MNRVAADMDRIKGPWSPEEDEALQKLVEKYGPRNWSLISKSFRGRSGKSCRLRWCNQLSPQVEHRAFTPEEDETIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCASMMIDDAGAVGGFDGSFSPRPLKRSVSAGAAVPVSTGLCMNPSTPGSPSGSDISESSVPVASSSQVYRPVPRTGGVLPPVETTSSSNDPPTSLSLSLPGLDSSEVSNRPADPTQTAPPANSKRLLSVMAPTPAPALPPAPPPALAPAPMSVLPQQVHLVRDDRSGERGPNQNGFLGFNFSAELLAVMQDMIRKEVWSYMAGLEQQNGVCFQAADGFRNASVKRIGISRIDS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0325 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 62 IPR017930 -
Lele51g0325 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 113 IPR017930 -
Lele51g0325 345 Pfam Myb-like DNA-binding domain 15 73 - -
Lele51g0325 345 MobiDBLite consensus disorder prediction 192 235 - -
Lele51g0325 345 SUPERFAMILY Homeodomain-like 9 105 IPR009057 -
Lele51g0325 345 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Lele51g0325 345 SMART sant 11 60 IPR001005 -
Lele51g0325 345 SMART sant 63 111 IPR001005 -
Lele51g0325 345 CDD SANT 14 56 IPR001005 -
Lele51g0325 345 FunFam MYB transcription factor 12 63 - -
Lele51g0325 345 MobiDBLite consensus disorder prediction 153 183 - -
Lele51g0325 345 ProSiteProfiles Myb-like domain profile. 7 58 IPR001005 -
Lele51g0325 345 FunFam Transcription factor MYB44 66 112 - -
Lele51g0325 345 Gene3D - 65 121 - -
Lele51g0325 345 CDD SANT 66 109 IPR001005 -
Lele51g0325 345 MobiDBLite consensus disorder prediction 153 235 - -
Lele51g0325 345 PANTHER MYB PROTEIN-RELATED 12 215 - -
Lele51g0325 345 Gene3D - 11 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0325 Lele-ChrLele51 1858569 1859606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0325 7 344 MYB Transcription Factor Family AT4G37260 48.876 1.26e-95 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele51g0325 Myb_DNA-bind_6 6.5e-18 CL0123