Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0309 ATGCCTCCTTCCCCCACTCCCTCCCTTGTCCTCGTCCTTCTCTTCTTCTCCCTCCTTTCTTCCTCTTCCACCGCCTCCTCCTCCACCATCCACTTGCTCCTCCCTTCCGACGCCGTTTCCCTCCTCTCCTTCAAATCCCAAGCCGACCGAGACAACAAGCTCCTTTACGCACTTAACGAGCGCTATGACTACTGTCAATGGCAGGGCGTCAAATGCTCCCATGGCAGAGTCGTTCGCTTCGTCCTTCAGAACTTTGGCCTCCGTGGCGTCTTCCCTCCTGACACCTTGTCTCGTCTCGACCAGCTTCGAGTTCTCAGCCTTCGCAACAACTCCCTTTCTGGTCCCATCCCCGATCTCTCCTCTCTCCTCAATCTCAAATCTCTCTTCCTCGACCATAACTCCTTCTCCGGTTCTTTCCCCCCTTCCATTCTCTTCCTCCATCGCCTTCTCACTCTTTCTCTCTCCCACAACAACCTCACCGGCTCCATCCCCGCCGGATTATCTATCCTCGACCGCTTGATTTCTCTTCGCCTCGATTCCAACTGGTTTAACGGAACTCTTCCCCCCTTGAACCAGTCCTCGCTCCGAATCTTCAATGTGTCCGGAAACAATTTGACTGGGCCGGTTCCGATGACGCCTACACTCAGTCATCTTCCCCCTGCGTCGTTTTCCGGGAACCAGGGTCTCTGTGGCGAGATCATTCACATAGCGTGTAACTCTCGGTCTCCGTTCTTCAGTCCCTCCAATGCCTCCACCTCCGCGGCGCCGCTTGGGCAAAGCGCGGAATCGCAGGGAATCGTGGTCGTTCCTTCACATTCATCCACTAAAAAGAAGCATAAGGACGCTGCCTTGATTCTAGGATTTACCATTGGGTTCTCGGTGCTCATTGCGTCCATCCTGTTCGCAATTGCACTGTTCAGGAAACGAAGCAGTTCCAGAAGACCAGAGAGCCCGAAAATACAAGAGTCATTGGCAACCAAAGATGTAAATGCGCCTCCTCCTGCATCTTTAGCCGTCGAAACGGAAATAGAGCAAAATAGGGAATGGAGTGAGAAGGCAAAGAAGATGGAGAAAATAAAAGAAGCACATAAGAGCGGGAATTTGGTGTTCTGCAGTGGGGAGCCACAGTTGTGTACAATAGAGCAGTTGATGAGAGCTTCGGCGGAGTTGCTGGGTAGGGGTAACATAGGAACAACGTACAAGGCGGTGTTGGATGGCCAGCTCATAATGACAGTGAAGAGGCTGGATGCTGTTAGAACAGCAATAACGAGCAGCCAAGAATTCGAGCATCACATGGAAATGGTGGGCGATCTCCGGCATCCGAATTTGGTGCCCGTTAGAGCTTATTTCCAGGCAAAGGGCGAGAGGCTGGTGATCTATGATTATCAACCTAATGGCAGTCTCTTTAACCTCATACATGGTTCGAAATCAACGAGAGCGAAGCCTCTTCACTGGACGTCATGCTTAAAGATAGCTGAAGATGTAGCCCATGGACTCGCCTATATACATCAAGCCTCGAGATTAATCCATGGCAACCTGAAGTCGACTAATGTCCTTTTTGGCGTCGACTTCGAAGCTTGTGTCACAGAGCATGGTTTGGCCTTCCTTGCGGATTTTTCATCGACTGAAGACCCTGACTCTGCGGCTTATAAAGCACCAGAGACTCGCAACTCTAGCCGCCGAGCCACTCCCAAGTCTGATGTATATGCCTTTGGGGTGATTCTATTAGAGCTTCTTACTGGTAAACATCCTTCTCAACATCCTTTCCTTGTGCCCGCGGATATGCAACATTGGGTTAGAGCAATGAGGGATGACGATGGTGCTGAACATAATGGGCTCGGTATGCTCACAGAAGTCGCTTGTATTTGCAGTGCAACGTCGCCTGAGCAGAGGCCGGCGATGTGGCAAGTCTTGAAGATGGTACAGGAGATAAAGGGCAGTGTAACGACTAACGATGGAGGATACAACAACTGCTAG 1977 0.5119 MPPSPTPSLVLVLLFFSLLSSSSTASSSTIHLLLPSDAVSLLSFKSQADRDNKLLYALNERYDYCQWQGVKCSHGRVVRFVLQNFGLRGVFPPDTLSRLDQLRVLSLRNNSLSGPIPDLSSLLNLKSLFLDHNSFSGSFPPSILFLHRLLTLSLSHNNLTGSIPAGLSILDRLISLRLDSNWFNGTLPPLNQSSLRIFNVSGNNLTGPVPMTPTLSHLPPASFSGNQGLCGEIIHIACNSRSPFFSPSNASTSAAPLGQSAESQGIVVVPSHSSTKKKHKDAALILGFTIGFSVLIASILFAIALFRKRSSSRRPESPKIQESLATKDVNAPPPASLAVETEIEQNREWSEKAKKMEKIKEAHKSGNLVFCSGEPQLCTIEQLMRASAELLGRGNIGTTYKAVLDGQLIMTVKRLDAVRTAITSSQEFEHHMEMVGDLRHPNLVPVRAYFQAKGERLVIYDYQPNGSLFNLIHGSKSTRAKPLHWTSCLKIAEDVAHGLAYIHQASRLIHGNLKSTNVLFGVDFEACVTEHGLAFLADFSSTEDPDSAAYKAPETRNSSRRATPKSDVYAFGVILLELLTGKHPSQHPFLVPADMQHWVRAMRDDDGAEHNGLGMLTEVACICSATSPEQRPAMWQVLKMVQEIKGSVTTNDGGYNNC 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0309 658 FunFam Leucine-rich repeat receptor-like protein kinase 148 240 - -
Lele51g0309 658 SUPERFAMILY L domain-like 35 231 - -
Lele51g0309 658 Gene3D Phosphorylase Kinase; domain 1 350 462 - -
Lele51g0309 658 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 645 - -
Lele51g0309 658 ProSiteProfiles Leucine-rich repeat profile. 101 123 IPR001611 GO:0005515
Lele51g0309 658 SUPERFAMILY Protein kinase-like (PK-like) 389 641 IPR011009 -
Lele51g0309 658 Gene3D Ribonuclease Inhibitor 191 241 IPR032675 -
Lele51g0309 658 MobiDBLite consensus disorder prediction 312 333 - -
Lele51g0309 658 FunFam Probable inactive receptor kinase At5g67200 36 146 - -
Lele51g0309 658 Pfam Protein kinase domain 388 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g0309 658 Gene3D Transferase(Phosphotransferase) domain 1 464 654 - -
Lele51g0309 658 ProSiteProfiles Protein kinase domain profile. 385 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g0309 658 Gene3D Ribonuclease Inhibitor 35 190 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0309 Lele-ChrLele51 1771615 1774736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0309 19 652 Receptor kinase-like Gene Family AT3G50230 55.335 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele51g0309 Pkinase 4.5e-28 CL0016