Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0302 ATGCCTGTGAGGGGGAGCCTCGTCCCACTTCCATTACTGGAAGGTTGGTTTGTTTTTGAAAGAGCGAAGCAGCGACCCCCACTCATTGGCGTGACGAGAGAGAGGATAAGCACGTTCCTAGTTTTTGCGAGGTTGGACTTGATGGCAATTTTGTCTGGGGTGAGTCCTGACTGCCTGTGTTGTTTTGTTGCTTGCTCAGAAGCTGAAGCCTTTAGCCAAAAAAGAATGTGGGATTTGAATGACTCGCCCGATTGTAGAAAGCACGAGGAATCCGAAGGCTGTTCTTCCTTGAAGACATCCATGGACGGCGACGAGGACAAAGGGAAAGGGGTCGGATCTATGTCGAATTCAAGCTCATCTGCGGTGGTAATCGAGGACGGATCGGAAGAAGAGGATGGTGAGAGGAGCAAAACATTGAAGAAGAAAAGCAGTAAGATATTCGGGTTCCGTGTGACCCAGGACGAGTCCATGGATGGTGACCCACCCGTGACCCGGCAGCTTTTTCCGGTGGAGGAGGAGGAGGCGGCGGCGGCCATGTCATCGGGTGGAGGGAGCACAGCCTTCCCTAGGGCCCACTGGGTGGGCGTGAGATTCTGTCAGCCAGAAGCAGTCGGCGCCGGTGCCGGGGGCGTAGGAAAATCCGTGGAAGTGTCGTCGCAGCCGATGAAAAAAAGTCGTCGAGGACCAAGGTCAAGGAGCTCTCAGTATAGGGGAGTTACCTTTTACAGAAGAACAGGTCGATGGGAATCACATATATGGGACTGTGGAAAACAAGTGTATCTGGGTGGATTTGACACGGCACATGCAGCTGCTCGTGCATATGATAGAGCGGCCATTAAGTTCCGGGGAGTGGAGGCCGACATCAACTTCAACATTGAAGACTACGAAGAAGACTTGAAGCAGATGAGCAATTTAACAAAGGAAGAGTTCGTGCACGTACTTCGTCGGCAAAGCACTGGGTTCCCCAGAGGAAGCTCCAAATATAGAGGCGTAACTCTGCATAAGTGTGGAAGATGGGAGGCTCGAATGGGCCAATTTCTTGGCAAAAAGTACGTTTATCTCGGTTTGTTTGACACCGAGATTGAAGCAGCAAGGGCTTATGACAAAGCAGCAATAAAATGTAATGGCAAAGAGGCCGTCACCAACTTCGATCCCAGCATCTACGAGAATGAGATCAATTCTGAATCGCCAGGTAACACTGTGGATCACAATCTGGATTTAAGTCTGGGCAATTCGAGCTCAAAGCAAGGCAATAATAATCAAGCACTGGGGAATAGTGATGTATCCGAATCAAGTTGGAGGAACAATGGAGGATTAACGAGGCCAACGATGACAGCGCTGGAGGGAGGTCAAACTCAGGTTCATCAATCTGCAGCATCTAGAGAAATGCAAAGATTTGGCGGCGCCAACAGGACTACATTATCTAGAGAGCCTCATCATCAAATGCTCAACAGTTTTGCTCCATCACATCTTCACCCACCGAGCTTTCATAATTTTCCAAGCAGCAGCAACGAAGGGCGAATAGGGAGTGATCTTTCACTGTCAATGAGCGATCACCATCATCATCAGCAATCGGGGCCTCCTTCTCATCTTCATTACATAGCAACTGCTGCAGCATCATCAGGATTCCCAACGCAGATTAACAGACTTTCCCAAGGATGGCTGCAGAAAAATGGGTTCCACACACTCATGAGACCCAACTGA 1704 0.4971 MPVRGSLVPLPLLEGWFVFERAKQRPPLIGVTRERISTFLVFARLDLMAILSGVSPDCLCCFVACSEAEAFSQKRMWDLNDSPDCRKHEESEGCSSLKTSMDGDEDKGKGVGSMSNSSSSAVVIEDGSEEEDGERSKTLKKKSSKIFGFRVTQDESMDGDPPVTRQLFPVEEEEAAAAMSSGGGSTAFPRAHWVGVRFCQPEAVGAGAGGVGKSVEVSSQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEEDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYENEINSESPGNTVDHNLDLSLGNSSSKQGNNNQALGNSDVSESSWRNNGGLTRPTMTALEGGQTQVHQSAASREMQRFGGANRTTLSREPHHQMLNSFAPSHLHPPSFHNFPSSSNEGRIGSDLSLSMSDHHHHQQSGPPSHLHYIATAAASSGFPTQINRLSQGWLQKNGFHTLMRPN 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0302 567 CDD AP2 326 386 IPR001471 GO:0003700|GO:0006355
Lele51g0302 567 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 161 475 - -
Lele51g0302 567 MobiDBLite consensus disorder prediction 484 528 - -
Lele51g0302 567 ProSiteProfiles AP2/ERF domain profile. 235 291 IPR001471 GO:0003700|GO:0006355
Lele51g0302 567 Pfam AP2 domain 235 283 IPR001471 GO:0003700|GO:0006355
Lele51g0302 567 Pfam AP2 domain 326 375 IPR001471 GO:0003700|GO:0006355
Lele51g0302 567 FunFam AP2-like ethylene-responsive transcription factor 234 293 - -
Lele51g0302 567 Gene3D AP2/ERF domain 234 293 IPR036955 GO:0003700|GO:0006355
Lele51g0302 567 Gene3D AP2/ERF domain 326 385 IPR036955 GO:0003700|GO:0006355
Lele51g0302 567 SUPERFAMILY DNA-binding domain 326 386 IPR016177 GO:0003677
Lele51g0302 567 SUPERFAMILY DNA-binding domain 234 292 IPR016177 GO:0003677
Lele51g0302 567 PRINTS Ethylene responsive element binding protein signature 328 339 IPR001471 GO:0003700|GO:0006355
Lele51g0302 567 PRINTS Ethylene responsive element binding protein signature 366 386 IPR001471 GO:0003700|GO:0006355
Lele51g0302 567 CDD AP2 235 292 IPR001471 GO:0003700|GO:0006355
Lele51g0302 567 SMART rav1_2 235 297 IPR001471 GO:0003700|GO:0006355
Lele51g0302 567 SMART rav1_2 327 390 IPR001471 GO:0003700|GO:0006355
Lele51g0302 567 MobiDBLite consensus disorder prediction 83 109 - -
Lele51g0302 567 MobiDBLite consensus disorder prediction 495 511 - -
Lele51g0302 567 MobiDBLite consensus disorder prediction 207 236 - -
Lele51g0302 567 ProSiteProfiles AP2/ERF domain profile. 327 384 IPR001471 GO:0003700|GO:0006355
Lele51g0302 567 FunFam AP2-like ethylene-responsive transcription factor 326 386 - -
Lele51g0302 567 MobiDBLite consensus disorder prediction 83 139 - -
Lele51g0302 567 MobiDBLite consensus disorder prediction 390 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0302 Lele-ChrLele51 1724139 1728944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0302 76 566 AP2-EREBP Transcription Factor Family AT4G36920 55.273 5.83e-137 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele51g0302 AP2 4e-10 CL0081