Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0295 ATGGGAGATATGTATCACTACGATAATACTGAGAATCATAATTTCCCTGCGTCTTCAACCTCATCTTCACCTCAAGACGAAATCTCGCTTTTTCTGCGTCAGATTCTCCTTCGTTCATCCTCCTCGTCAGCATCATCGTCGCTGCTTGTGACACACACGGTTAAAATCGCCCACACCTCCATGTCTGGACTCTGCAGTTCCCACGCTACGCTGGAGAATAATGCTCACCTTTCCCACCGATCATCACTTTTCCAAGATGGGATCTCCGTCGCTGATTCCTCCATCGGAGGAGGCGCTCCAAACGATGCTTTTCTTTCCTCTTCGGGGACTCATACGTTGGCCAATATGAAGGATAGTTCTGCTGCAAACGTGCCTTCGTCATCTTTCGGAGTAAGTGAGAACGAGTTCGATGAGTATGATTGCGAGAGTGAGGAGGGGATCGAAGCATTGGTGGAACAGCAGCCGGTAAAGTCAGTTCCTCCGAGAAGTTCATCGAAGAGAAGCAGAGCTGCAGAAGTTCATAATTTGTCTGAAAAGAGAAGGAGAAGCAGGATCAACGAAAAAATGAAGGCATTGCAAAATCTGATTCCAAATTCAAACAAGACAGACAAGGCTTCGATGCTGGATGAAGCTATTGAATACCTGAAACAACTTCAGCTCCAAGTACAGACGCTGTCAATGAGAAATGGTTTGAGTTTGCATCCCATGTGCTTTTCTGAAGACTTGCAGGCTCAGCAGTTTTGTCAGATGAGATCTGAGTTCAATGAAGAAAACATGTCATTGCCTTTAAACATGGCAACTACTCTGCCTTTGACCCAAGAAAATCCCTTGCAATATGAGTCCAAATCCAGTCTACCTGACAAACTCAATACACAGGACCAACCATTAGTGCCCTCTCCATCGTACACAATCAACCCAGAAACTTCTTTTGGGCTAGAATCCCCAATTCTGCCGCATATAAGATCCTTCCCACAGAAAAGAACTTCTGAGATGCTTAGCAATGAGATATTGCGGCACCAGCAATTAAATTCGAGCCATTCAGATATCAATCCTTTAGGTGGTTCTCAAGTGTCACACGCCTTTGATATGCAAACGCCCGAGCAGAAGGACAGGGGCTTTGAAACAGGCATTGCGGGAAAAGATCAATTGGCATCGATCCTAAGAAAAGATCAGGGGCTTTGA 1182 0.4543 MGDMYHYDNTENHNFPASSTSSSPQDEISLFLRQILLRSSSSSASSSLLVTHTVKIAHTSMSGLCSSHATLENNAHLSHRSSLFQDGISVADSSIGGGAPNDAFLSSSGTHTLANMKDSSAANVPSSSFGVSENEFDEYDCESEEGIEALVEQQPVKSVPPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLSMRNGLSLHPMCFSEDLQAQQFCQMRSEFNEENMSLPLNMATTLPLTQENPLQYESKSSLPDKLNTQDQPLVPSPSYTINPETSFGLESPILPHIRSFPQKRTSEMLSNEILRHQQLNSSHSDINPLGGSQVSHAFDMQTPEQKDRGFETGIAGKDQLASILRKDQGL 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0295 393 MobiDBLite consensus disorder prediction 167 181 - -
Lele51g0295 393 Pfam Helix-loop-helix DNA-binding domain 173 219 IPR011598 GO:0046983
Lele51g0295 393 CDD bHLH_AtPIF_like 169 231 - -
Lele51g0295 393 Gene3D - 164 229 IPR036638 GO:0046983
Lele51g0295 393 MobiDBLite consensus disorder prediction 1 23 - -
Lele51g0295 393 FunFam Basic helix-loop-helix transcription factor 164 227 - -
Lele51g0295 393 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 21 344 IPR031066 -
Lele51g0295 393 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 166 229 IPR036638 GO:0046983
Lele51g0295 393 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 169 218 IPR011598 GO:0046983
Lele51g0295 393 MobiDBLite consensus disorder prediction 153 181 - -
Lele51g0295 393 Coils Coil 208 228 - -
Lele51g0295 393 SMART finulus 175 224 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0295 Lele-ChrLele51 1673570 1675975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0295 7 371 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 43.684 1.09e-54 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele51g0295 HLH 4.6e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0295 51 1673570 1675975 Lele53g0135 53 1063536 1065588 CCT
Lele51g0295 51 1673570 1675975 Lele55g1357 55 19974111 19976189 CCT
Lele51g0295 51 1673570 1675975 Lele51g0295 51 1673570 1675975 ECH
Lele49g0284 49 1674116 1676484 Lele51g0295 51 1673570 1675975 hybridization
Lele50g0295 50 1719608 1729525 Lele51g0295 51 1673570 1675975 hybridization