Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0287 ATGGCTTCTACCTTGTCTTACAGCTCTCTTAATCCCTCAACGACATCTTTCTCAAGAACCAGTTTCTCAATTCATACTTATAAAGAATTTTCATTGGATCTTCCACCCTTTGGAAGCAGAACAATTAAGCGTACGAAGAAACTGTTGCCGATTACAGCTGCAGTCACAGAAGCACCACCTGCTGCTTCACCGTCAACACAAACTGTGACTGAAAATGATGGGAATCGAATTCGGATACTCGTGGCAGGCGGTGGGATCGGTGGTTTGGTCTTTGCTCTAGCTGCAAAGAGAAAAGGCTTTGAAGTTTTGGTGTTTGAGAAGGATATGAGTGCTATAAGGGGGGAGGGACAATACAGGGGTCCAATTCAGATACAGAGTAATGCATTAGCTGCTTTGGAAGCTATAGATTCGGAGGTTGCTGAAGAAGTTATGAGGGTCGGTTGTATAACGGGTGATAGAATCAATGGACTCGTAGACGGAGTTTCTGGTTCTTGGTACATCAAGTTTGATACATTCACTCCTGCAGCGGAACGTGGGCTTCCGGTCACAAGAGTTATAAGTCGAATGGCTTTACAAGAGATACTTGCCCGAGCTGTTGGAGAAGATGCCATTATGAATTCCAGTAATGTTGTTAATTTTGTGGATGACGGAAACAAGGTAACAGTAGAGCTTGAGAATGGTGAGAAATATGATGGTGATCTATTGGTCGGAGCAGATGGTATATGGTCCAAGGTGAGGAAACAGTTATTTGGGCCAACAGAAGCAGTTTACTCTGGCTACACTTGTTACACTGGCATTGCAGATTTTATTCCTGCTGACATTGACTCTGTTGGGTATCGAGTATTCTTGGGACACAAACAATACTTTGTATCTTCAGATGTTGGCGGGGGGAAGATGCAATGGTATGCATTTCAGAAAGAACCACCGGGTGGTGTTGATGGCCCCAGTGGAAAAAAGGAAAGGCTCCTTCAGATATTTCAGGGCTGGTGTGATAATGTAATAGATCTATTACTTGCCACAGACGAAGAGGCAATTCTGAGACGGGACATATATGATAGGACACCAGTATTCACATGGGGAAAGGGCCGTGTGACCTTGCTTGGTGATTCTGTACATGCCATGCAACCAAATATGGGTCAAGGAGGATGCATGGCTATCGAGGACAGTTATCAGCTTGCGTGGGAGTTGGATAATGCATGGGAACAATGTATAAAATCAGGGACTCCAATTGACATTGATTCTTCCCTCAGGAGCTATGAGAGAGAAAGAGTACTACGAGTTGCCATTATTCATGGTATGGCAAGAATGGCAGCTCTTATGGCTTCCACCTATAAGGCATATATTGGGGTTGGTCTTGGCCCTTTAGAGTTTTTGACCAAGTTTCGAATACCGCATCCTGGACGAGTTGGAGGGAGGCTTGTAATTGACAAGGTTATGCCTTTAATGTTAAGTTGGGTCTTAGGTGGCAATAGCTCTAAACTTGAAGGGAGACCTGTATGTTGCAGACTCTCAGACAAAGCAAATGACCAGTTACCCAAATGGTTTGAAGATGACGATGCACTTGAACGTGCTATTAATGGAGAGTGGATTTTATTACCATGTGGGGATGAAGTGGGACTTTTGAAGCCTATTTCGTTAAGTCAAGATGAGAACAAACCTTGCATAGTTGGAAGCACCCCGCAAGAGGACTATCTAAGCAGTTCAATTGTAATACCTTCACCACAGGTTTCTCAAACACATGCTCGAATTAACTACAAGGACGGCGCCTTCTTCCTGACTGATTTGCGCAGTCAACATGGCACCTGGATAACTGACAATGAAGGAAGGCGGTATCGGGTGCCTCCAAATTATCCTGCTCGTGTTCACCCATGTGATGTTATCGAATTTGGTTCTAATAAGGCTGCATTTCGTGTGAAGGTGACAAGGTCTGCTCCAAGATATTCCGAGCAAGGAACGAAGATTTTACTGGAAAGATGA 1977 0.4421 MASTLSYSSLNPSTTSFSRTSFSIHTYKEFSLDLPPFGSRTIKRTKKLLPITAAVTEAPPAASPSTQTVTENDGNRIRILVAGGGIGGLVFALAAKRKGFEVLVFEKDMSAIRGEGQYRGPIQIQSNALAALEAIDSEVAEEVMRVGCITGDRINGLVDGVSGSWYIKFDTFTPAAERGLPVTRVISRMALQEILARAVGEDAIMNSSNVVNFVDDGNKVTVELENGEKYDGDLLVGADGIWSKVRKQLFGPTEAVYSGYTCYTGIADFIPADIDSVGYRVFLGHKQYFVSSDVGGGKMQWYAFQKEPPGGVDGPSGKKERLLQIFQGWCDNVIDLLLATDEEAILRRDIYDRTPVFTWGKGRVTLLGDSVHAMQPNMGQGGCMAIEDSYQLAWELDNAWEQCIKSGTPIDIDSSLRSYERERVLRVAIIHGMARMAALMASTYKAYIGVGLGPLEFLTKFRIPHPGRVGGRLVIDKVMPLMLSWVLGGNSSKLEGRPVCCRLSDKANDQLPKWFEDDDALERAINGEWILLPCGDEVGLLKPISLSQDENKPCIVGSTPQEDYLSSSIVIPSPQVSQTHARINYKDGAFFLTDLRSQHGTWITDNEGRRYRVPPNYPARVHPCDVIEFGSNKAAFRVKVTRSAPRYSEQGTKILLER 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0287 658 Pfam FAD binding domain 78 249 IPR002938 GO:0071949
Lele51g0287 658 Pfam FAD binding domain 358 398 IPR002938 GO:0071949
Lele51g0287 658 PANTHER - 43 528 - -
Lele51g0287 658 SUPERFAMILY FAD/NAD(P)-binding domain 78 445 IPR036188 -
Lele51g0287 658 SUPERFAMILY SMAD/FHA domain 519 638 IPR008984 GO:0005515
Lele51g0287 658 PIRSF Zeaxanthin_epoxidase 1 657 IPR017079 GO:0009507|GO:0009688|GO:0016020|GO:0052662
Lele51g0287 658 ProSiteProfiles Forkhead-associated (FHA) domain profile. 554 608 IPR000253 GO:0005515
Lele51g0287 658 SMART FHA_2 553 608 IPR000253 GO:0005515
Lele51g0287 658 CDD FHA 529 640 IPR000253 GO:0005515
Lele51g0287 658 Gene3D - 537 641 - -
Lele51g0287 658 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 361 376 - -
Lele51g0287 658 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 231 246 - -
Lele51g0287 658 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 376 392 - -
Lele51g0287 658 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 78 100 - -
Lele51g0287 658 Pfam FHA domain 566 630 IPR000253 GO:0005515
Lele51g0287 658 Gene3D - 78 449 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0287 Lele-ChrLele51 1617682 1622980 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0287 79 420 Miscellaneous Gene Families AT5G05320 27.247 1.62e-18 86.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0287 51 1617682 1622980 Lele53g0127 53 1012653 1013852 CCT
Lele51g0287 51 1617682 1622980 Lele54g0126 54 1066125 1067330 CCT
Lele51g0287 51 1617682 1622980 Lele55g1364 55 20023075 20024283 CCT
Lele51g0287 51 1617682 1622980 Lele56g1307 56 16320722 16321927 CCT
Lele53g0132 53 1044426 1045595 Lele51g0287 51 1617682 1622980 CCT
Lele54g0132 54 1113410 1114477 Lele51g0287 51 1617682 1622980 CCT
Lele55g1360 55 19993681 19994742 Lele51g0287 51 1617682 1622980 CCT
Lele56g1303 56 16282964 16284025 Lele51g0287 51 1617682 1622980 CCT
Lele51g0287 51 1617682 1622980 Lele51g0287 51 1617682 1622980 ECH
Lele49g0274 49 1601326 1606700 Lele51g0287 51 1617682 1622980 hybridization
Lele50g0284 50 1665028 1670752 Lele51g0287 51 1617682 1622980 hybridization