Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0275 ATGCCTTTTCAAGGCGCGCATTCGTTAATTGGAACCTCGCGTTTCACCCAAGCAGGCAGCGATTCTTGTTTGTATTGTGTTGAGATGGTGGTGGGTCATGGAAAGAACCGAGCGTTAGACGATTGGTCGGCTACGAAGGAGGTGGTGGACCATCCTCGTGCTTCTACGGCCGCCGGGAAAGCCGTTAATCCGCCGCGCCACGGTAAAAATACGGATGACGATGATGACTTAACCCTGGCCAATTGGTCAAAGTCTCCCATACGCGTTCCTCCTTCAACCAAGAACAAACGGAACAAGATGGTGCAGAATCAACACAGGCTCATGAACATTCAGAAAAAACATTCGGATTCCATACCTAATCAAGTTCAGTTTTTATGGTCAACGGCCAGTAGGAAGGAGGCGATACACTCATAAGATTCTAACAAATGCTTTTTCAGGGCTTATCCGATCAGGCACAAAAGCCTACAAGGTTGCTCCTCTAAGATGGCAACAGAAAGGACACTATCAGCAGGAGAGGCCAGGTCGGCTGCTGTGTTTCGAGCAGAGATGATCCAATCAAAGTTAGATCCGAGATTCCCTAGCTTTGTCAAGTCATTGGTCAGATCACATGTTGCTGGTTGTTTTTGGATGGGGCTCCCCGCGTTTTTCTGTAAAAGACACTTACCGGATAATGACACTACGATCACTTTGGAAGATGAATCTTGTAAAGAATACCAATTGAAATACATTGCTTGCAAGACAGGTTTAAGCGCTGGTTGGAGGCAGTTTTCTGCAGTCCACAAATTGCAGGAGGGAGATGTTTTGGTCTTCCAATTAGTTGAACCTTCTAAATTTAAGTATGCTCTCCTGAGTAATAGCCCTAAGAGGAAACAAGAAAAATCTGACTCACCATCTCCATTTGTCCAAAAGAAAAAGAAGAAAAGTGTGTCGAGGTTTTCCCCCAAGGTTAGGCAGTGTGCAGAACAATGTGAATATGAAAGTGATGAAGCTGGTTCAGAAGTACTTGAGAGCCTTGGAACTGAGCTTAAATTGAAGGATGTAAAAAGTTTTGAAAATTTCAGTATCATAATTGACGGAATTCCAATAGATTCTGAGCTCCCCGAGGAGGTTCGAAGTAAGTATTACAAACTCTGTCATAGCCAGCAAGCTTTTCTACACGAGAATCTCATCAAGGGCATCAACTATAACCTCATTGTCGGCATTATATATGAAGTTGTCAACATTTCTGATGCCTTGAAATCCAGCTCACTGCATGTCTCAGCCGCTGAATTTGCTAAATGGGATAAAGAGTTGCTAGCCTTTGAGTGTTTGGGGATGAATATGGAGTTTTTAAGACACCGGTTATGCAGGCTTGTAAACTTGGCGTATGAGACACAAGATGCCTCTGAGACTTCAAGGTATACAGCAACGGCGACGTCAACAACTGCATTCAGTCGATCAGATAACGAAATAATGAATATTGAAACAAAGCTTGTAGAATTGAAAGAAGCTTGTGATGGTTTTGGTGCTTATATTGAGAGTTTGAAGTGCAAAGCTGAGTGCTTCCATCACTAG 1554 0.435 MPFQGAHSLIGTSRFTQAGSDSCLYCVEMVVGHGKNRALDDWSATKEVVDHPRASTAAGKAVNPPRHGKNTDDDDDLTLANWSKSPIRVPPSTKNKRNKMVQNQHRLMNIQKKHSDSIPNQVQFLWSTASRKEAIHSXDSNKCFFRAYPIRHKSLQGCSSKMATERTLSAGEARSAAVFRAEMIQSKLDPRFPSFVKSLVRSHVAGCFWMGLPAFFCKRHLPDNDTTITLEDESCKEYQLKYIACKTGLSAGWRQFSAVHKLQEGDVLVFQLVEPSKFKYALLSNSPKRKQEKSDSPSPFVQKKKKKSVSRFSPKVRQCAEQCEYESDEAGSEVLESLGTELKLKDVKSFENFSIIIDGIPIDSELPEEVRSKYYKLCHSQQAFLHENLIKGINYNLIVGIIYEVVNISDALKSSSLHVSAAEFAKWDKELLAFECLGMNMEFLRHRLCRLVNLAYETQDASETSRYTATATSTTAFSRSDNEIMNIETKLVELKEACDGFGAYIESLKCKAECFHH 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0275 517 Pfam B3 DNA binding domain 195 280 IPR003340 GO:0003677
Lele51g0275 517 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 102 291 IPR044837 -
Lele51g0275 517 ProSiteProfiles B3 DNA-binding domain profile. 195 286 IPR003340 GO:0003677
Lele51g0275 517 MobiDBLite consensus disorder prediction 49 95 - -
Lele51g0275 517 CDD B3_DNA 193 279 IPR003340 GO:0003677
Lele51g0275 517 Gene3D - 172 283 IPR015300 -
Lele51g0275 517 SUPERFAMILY DNA-binding pseudobarrel domain 189 280 IPR015300 -
Lele51g0275 517 SMART B3_2 195 286 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0275 Lele-ChrLele51 1570293 1573556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0275 166 283 B3 DNA Binding Superfamily AT3G19184 46.610 6.59e-32 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele51g0275 B3 2.5e-14 CL0405