Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0260 ATGTCCTCATCGAATTCTCCGTGCGCTGCGTGCAAGTGTTTGAGGCGGAAATGCACGCAAGAATGCGTGTTCGCACCGTACTTCCCACCGGACAATCCTCAGAGGTTCGCTTACGTCCACAGGGTATTCGGGGCAAGCAATGTCGCTAAGCTTCTCAATGAGCTCAACGCCGCGCAGAGAGACGACGCCGTCAAGTCTCTGGCTTACGAAGCCGAGGCCCGTCTCCGGGACCCAGTCTACGGTTGTGTGGGTCTCATCTCCATCCTTCAGCACAGGCTCAGGCAGATCCAAGTGGAACTCAATAATGCCAAGAAGGAACTCGCCACGTATATTGGACCTCAGGCTCTTCAGGCCATGCCTCCCACCATTCTAGCACCTTCCGGAATGATCCCACAACAGCACCCAAGCAACCCATATTCTTCCACCGCCGGTTATCCCTACAACAACATGACACCGCCTACTCCTATGACCAATATTCCGACTGGTGACTCTTCTCATAGCGGCCAACTGGTGATTCGTGACCCTTCCCAGCAGCATCAGATCTTGGATGCCCAGCAGTTGGCCGCCGCCGTGGCGGCGAGAGAGCAACAAGATATGTTTCGAGGTTATGAGCAGCAGCAACAGCCACAAGAGTTCCTGAGATTCAATGGTGGTTACGATGTGGGTTCAGTTTCTGGGAGTGGATTCAACAATCATATTTCTTCAACCGCTGCTCCCACCGAGATGTCTCCTTCCTTGGCTCTTGGATCCTTCGACAGCCCTTACGGCGGGCAGATGCAACCGCCGCAAGCCGAACACGACCACCAGCTTCGAGCTCAGCTAATGCTTTCCCCACAGCAGCTGCAACCACAACAACAAAGGCAGCAGTCACAGCAATCCCACCAGCAGAAACAGTCAGAAAGCGAGGAGGGTAGGAGTGGCATCTGCCTTTCTTGTTGA 939 0.5442 MSSSNSPCAACKCLRRKCTQECVFAPYFPPDNPQRFAYVHRVFGASNVAKLLNELNAAQRDDAVKSLAYEAEARLRDPVYGCVGLISILQHRLRQIQVELNNAKKELATYIGPQALQAMPPTILAPSGMIPQQHPSNPYSSTAGYPYNNMTPPTPMTNIPTGDSSHSGQLVIRDPSQQHQILDAQQLAAAVAAREQQDMFRGYEQQQQPQEFLRFNGGYDVGSVSGSGFNNHISSTAAPTEMSPSLALGSFDSPYGGQMQPPQAEHDHQLRAQLMLSPQQLQPQQQRQQSQQSHQQKQSESEEGRSGICLSC 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0260 312 MobiDBLite consensus disorder prediction 235 312 - -
Lele51g0260 312 MobiDBLite consensus disorder prediction 273 306 - -
Lele51g0260 312 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Lele51g0260 312 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 296 - -
Lele51g0260 312 Coils Coil 86 106 - -
Lele51g0260 312 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0260 Lele-ChrLele51 1483553 1484491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0260 1 308 AS2 family AT5G66870 50.459 1.35e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele51g0260 LOB 7.7e-41 No_clan