Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0254 ATGGCAGAAAAGGTTATCGAACTTGTACTTGACGAACTGCTGAGCATAGTTTTGGAGGCGAAGGACAGGGCAATTCAATTCAGACCCACCCTTGAACGCCTAGCAAGCACCCTCAGGTCAATAAAACCAGTGATCGAACAGATAAACCAATACAACAGGCAACTAGATCGGTCGGAGGATGAAACAAAGAAGTTAATTGAAGATGTGAAGAATGGCGAGAAGCTTGTTCTCAAGTGCTCAAAAATTCGGTGGTGGGAATGCTGCTATAGGCCCCAATACCAGGAGGAACTTGAAGATTTGGATCAGTCACTTGTGAGGTTCTTTCAAGTTGATATGCAAGTTCAGACGGCGAGGGATGCGAAGGAGACGCTGATAGAGGTGAAAGATATTTATATGGAGATTAAGAAACTGAGTGCGGTTGCGAGAAATGAAAGAGGCCTGTGCTCAGCTCCCGATCCGCCAGCATTCACTGTTGGATTGGAGGTTCATGTTTGGGAATTGAAGGAGCGGCTTCTCCAGGATGATGTTTCTGTGATAGTGGTCACTGGCTCGCCCGGTTCTGGGAAGACTACATTGGTCAAAAAGTTCTGTGGGGATGCTAATGTCAGAGGTAAATTCAAGGACAATATCTTCTTTGTCAAATTCTCGGAGACGCCAAATTTGAACGTCATTGTACAGAAACTTTATCAACACCATGGTCGCTCAGAATCCGAGCCTCAAAATGATGAAGAAGCGATTGACCAATTGAAACTTTTGCTAAAGCAAATTGGGAAAAATCCTACACTGTTGGTTCTGGACGATGTTTGGGATAGATCAGAATCTCTTGTTGATAATTTTCTTATGCAGCTACCAGACTTTAAGATTTTAGTGACTTCCAGATTTGCAATTAGTAGATTCGGCACTCCACATTCCTTGAAACCCCTTGATGATGAGGATGCCGTGGAACTTTTCCGCCACTCAGCACAACTGAAGGACAGCAGCTTTGATATTCCTGATCATATTGTGAGAGAGATAGTCCAAGGTTGCAGTGGTTCTCCAATGGTACTAAATGCGATTGGCAGGTCACTCTGTGGGAAGCATTCTGTGCGTTTCATGGACCTAGGTTTATTTCCTGAAGACGAGAAGATTCCTGCAGCTTCTCTTGTTGATATGTGGGGGGAACTGCATGGAGAAAATGACAAAAATGCAATGGAGAAGATTTATGAACTGGCCACCCGTAACATGGTTGATATTGTCATAAGGAACTTTGCAAGTGGTAAAAGTAACTTCAATAGCTACTTTGTCATGCGGCATGATCTTTTTCAGGAGCTAGCTATCCATCAAAGGCAAATTAGCCAGGAGCCACTGGAAAAGAGGAAAAGACTGATTATTAACATAACTGGAAATGAATTTCCCCAGTGGTGGACTGAACAAAAAGAGTATCATATAGCTGCCCGCGTATTATCTATATCAACTGATGAATTATTCTCTTCTGATTGGTGCAACTTGATACCAACTGAAGTTAAGGTTCTAGTTTTGAACTTTCGAGGGAAGAAGTACACCATACCAAGTTTCATAGAGAAAATGAGTAAACTAAAAGTCCTGTTAATCACAAATTATGGTTTCCATCCTGCTGCTGAGTTAGAGAATTTAGAACTGCTTAATTTGCTGCCCAATCTTAAAAGAATTAGACTGGAGGGTGTATTGATTCCTTCCCTCGTTGAGAAAAGAGTGCAGTTGAAGAAGATTCAGAAACTATCTCTGTTTATGTGCAACGTAAATGAAGCTTTCAGAAATTTTTCCATCCAAGTTTCAGATATGTTGCCAAACTTGGTGGAACTGAACATTGACTACTGCAACATGGTGGAACTGCCAGTTGGGTTGTGTGGTATTTTTGTTTTAAAGAAGTTAAGCATTACCAGTTGCCACAAGCTTTCTGCCCTTCCTGAAGAAATTGGGGAGTTGGTCAATTTGGAGTTGCTAAGGGTTAGTTCTTGTTCTGATTTAGCAGAGTTTCCAGACTCAGTTTCCAGCCTCAAAAAGCTTGAGTTTCTTGACATCTCTTACTGCGTAAGCCTTAGTAGATTGCCAGATCATATTGGAAAATGGTGTGGTTCGAAGTTGTTACAATCAACTTTGGAGAGTTTGATTTCTTTGGTAGTTTCAAGAAGAGAGAAATTAGCCATGGCAGTGGCAGAGGCTGCAAAACTAATTGATGGAGCTGATCTAGCACTGGTGCTTCAAGAGTCGTTGAAGAAGATAATGGAGATCATCAATAAAGCTCACAACAGAACATCCAGACTCCAAATATTGAGGTCAACTCTGAAGGATTCCACGTCGTTAGTGGAAGACATAAAAAAATTTAATGATAACTTAGATCAGCCCAGAAAAGAAATAGAAAAGCTTGTCCAGGAAAAGGAAGCAGGAGATGAGCTCCTAAGCAAGTCCCCGAAAATCCGTTTCTTAAAATTCCCATTTGCAAAATCCTATGAGGGCAAGCCTGGAGAAAGGCAGGGTTCAATCTTCAAGTGCCTGTCCTTTAATTCGAGAGGTGAAGATAAGATGGTAAGGGATGTGAAGGAGACTCTGAAGCAGGTGAGAGAAGTTCTGGAAACTATGAGCAAAGAAAATTCTGAGCACGGAATTACGTGCTCGCGTCCTCAGAACCCAGAATTCGTTATCGGCATGGAGGAGCCTTTGTTGAGGTTGAAGATGGAGCTCCTCAAGGATGGTGCATCCATTCTTGGGTTGACGGGTCTACCAGGATCCGGAAAGACCACGTTGGCTAGACGGGTCTGCGGGGATGAACAGGTCAAAGGTAAATTCAGGGACCATATCTTGTTTGTGACCTTCTCAAAAACACCCAACTTCAAGGTCATTGTGGGGGCGCTATTTCAACGTTGTGGGAAGGTTCCCGAGTTTCGTAGCGACGAAGAAGCGGCTAAAGAATTGGGATTTCTGTTGAGTAAAATATCGGGAAGTCCAATATTGCTAGTGCTGGATGACGTTTGGCCCGGCTCAGAATCTCTTGTTCAGAACTTCAAGTTCCTGATTCCCAATTATAAGATTTTGATCACTTCAAGAGTTACATTTCCAACAATGAACCGTCAAATCATATTGGAACCACTTCGTTATGAAGATGCACTAACACTTTTCTGTCACTTTGCTCTCGTAAAAGACAATTGTTCGTATATTCCCGACGAATTACTTGTCCAACAGGTTGTGAAAAGTTGTAAGGGCCTACCTTTGGCCATTAAAGTAATCGCTAGATCACTGTGTCAGCAGCCTCATGAAACTTGGCTAAAGATGGTGAAGGAATGGTCGAAAGGTCATTCTATTATTGATTCCAATTCAAATTTGCTTAAGTTCCTCCAAGGAAGCTTGTGTCTTTTGGAAGATGTGCCCATCATCAAGGAGTGCTTCATGGACCTAGGGTTATTTCCTGAAGACCAAAGAATTCCTGCTACGGCTCTCATTGATATGTGGGCGGAACTGTATAAACTTGACGATGACGGCAAAGAAGCAATGGCCATAATCAATAAATTAGTCTCCCTGAATTTGGCAAATCTCCTTGTTACAAGGAAAGTTGAAAGTGATACAGACAGTTACTACGCCAACCACTTCATCATGCAGCATGACCTTCTAAGAGAGCTTGCAATTCACCAAAGCAACCAAGAACCATTAGAACGGAGAAGAAGATTGATGGTTGACATAAATGAAAATAATCGCCAATGGTGTCTAGAGGAGCAGCAGCGAGGCATTATTACCCTCGTGTCATCAATATTCCTTAAATGGTGCGTTAAACAAAAGCAGCAACCTGCCATTGCGCGGACATTGTCGATATCAACTGATGAAGCATTCACTTCAGATTGGGACAAAACACAATTAACTGACACTGAGGTTCTAATATTGAATATTCGTACTAAGCGTTATTCCTTGCCAAAGTTCATGGAGAAAATGAATAGTCTAAGGGTTCTAATATGCACTAATTATGGTTATCATACTTCCGGATTGGAAAACTTTGAGCTTCTTGATTCTTTATCTACCCTGAAAAGAATTAGACTGGAGAAGGTTTCTTTTCCTTCCCTTGGCAAATTGGAGAACCTGCAAAAATTATCCCTTTATATGTGTGATACAAGTCTAGCTTTTGGAAGCTGTAAGATACCAATTTCAGATGCATTGCCGATTCTAGTAGAATTGAACATTGACTATTGCAAAGATATGATGGAATTGCCTTCTGGTATCTGTGATATTAAAACTCTCAGAAAGCTTAGTATTTCTAACTGCCACAAGTTTTCTACTTTGCCCCAAGAAATAGCAAGGCTGGAGAATTTGGAACTACTGAGGCTTAATTCCTGTACTGATTTAGGAGGTATACCAGAATCAATTGGTTGGCTTTCCAGGCTACGTTTTCTTGACATATCAAACTGCCTAAGCCTAAGAAATTTACCAGAGAGCATTGGTAACTTGCAAAACATAGAGAAGTTGTACATGACAGGTTGCTCAAGGTGTGAATTGCCAGACTCGGTCATGAATCTTGATCATTTAAAAAGTGTAACATGTGATGAGGAGACGGCTGCTTCGTGGGAGGTTTTCAAGCCAGAGCTTTCCGATCTAAAGATTGAGGTGCCACATGTAGAAGTTAACTTAAATTGGCTTCTTGGGACAAGCTCCTAA 4656 0.416 MAEKVIELVLDELLSIVLEAKDRAIQFRPTLERLASTLRSIKPVIEQINQYNRQLDRSEDETKKLIEDVKNGEKLVLKCSKIRWWECCYRPQYQEELEDLDQSLVRFFQVDMQVQTARDAKETLIEVKDIYMEIKKLSAVARNERGLCSAPDPPAFTVGLEVHVWELKERLLQDDVSVIVVTGSPGSGKTTLVKKFCGDANVRGKFKDNIFFVKFSETPNLNVIVQKLYQHHGRSESEPQNDEEAIDQLKLLLKQIGKNPTLLVLDDVWDRSESLVDNFLMQLPDFKILVTSRFAISRFGTPHSLKPLDDEDAVELFRHSAQLKDSSFDIPDHIVREIVQGCSGSPMVLNAIGRSLCGKHSVRFMDLGLFPEDEKIPAASLVDMWGELHGENDKNAMEKIYELATRNMVDIVIRNFASGKSNFNSYFVMRHDLFQELAIHQRQISQEPLEKRKRLIINITGNEFPQWWTEQKEYHIAARVLSISTDELFSSDWCNLIPTEVKVLVLNFRGKKYTIPSFIEKMSKLKVLLITNYGFHPAAELENLELLNLLPNLKRIRLEGVLIPSLVEKRVQLKKIQKLSLFMCNVNEAFRNFSIQVSDMLPNLVELNIDYCNMVELPVGLCGIFVLKKLSITSCHKLSALPEEIGELVNLELLRVSSCSDLAEFPDSVSSLKKLEFLDISYCVSLSRLPDHIGKWCGSKLLQSTLESLISLVVSRREKLAMAVAEAAKLIDGADLALVLQESLKKIMEIINKAHNRTSRLQILRSTLKDSTSLVEDIKKFNDNLDQPRKEIEKLVQEKEAGDELLSKSPKIRFLKFPFAKSYEGKPGERQGSIFKCLSFNSRGEDKMVRDVKETLKQVREVLETMSKENSEHGITCSRPQNPEFVIGMEEPLLRLKMELLKDGASILGLTGLPGSGKTTLARRVCGDEQVKGKFRDHILFVTFSKTPNFKVIVGALFQRCGKVPEFRSDEEAAKELGFLLSKISGSPILLVLDDVWPGSESLVQNFKFLIPNYKILITSRVTFPTMNRQIILEPLRYEDALTLFCHFALVKDNCSYIPDELLVQQVVKSCKGLPLAIKVIARSLCQQPHETWLKMVKEWSKGHSIIDSNSNLLKFLQGSLCLLEDVPIIKECFMDLGLFPEDQRIPATALIDMWAELYKLDDDGKEAMAIINKLVSLNLANLLVTRKVESDTDSYYANHFIMQHDLLRELAIHQSNQEPLERRRRLMVDINENNRQWCLEEQQRGIITLVSSIFLKWCVKQKQQPAIARTLSISTDEAFTSDWDKTQLTDTEVLILNIRTKRYSLPKFMEKMNSLRVLICTNYGYHTSGLENFELLDSLSTLKRIRLEKVSFPSLGKLENLQKLSLYMCDTSLAFGSCKIPISDALPILVELNIDYCKDMMELPSGICDIKTLRKLSISNCHKFSTLPQEIARLENLELLRLNSCTDLGGIPESIGWLSRLRFLDISNCLSLRNLPESIGNLQNIEKLYMTGCSRCELPDSVMNLDHLKSVTCDEETAASWEVFKPELSDLKIEVPHVEVNLNWLLGTSS 1551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0254 1551 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 729 824 IPR008808 -
Lele51g0254 1551 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 5 135 IPR008808 -
Lele51g0254 1551 Coils Coil 41 68 - -
Lele51g0254 1551 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 877 1137 IPR027417 -
Lele51g0254 1551 Coils Coil 778 798 - -
Lele51g0254 1551 ProSiteProfiles RPW8 domain profile. 1 146 IPR008808 -
Lele51g0254 1551 Pfam NB-ARC domain 162 362 IPR002182 GO:0043531
Lele51g0254 1551 Pfam NB-ARC domain 893 1100 IPR002182 GO:0043531
Lele51g0254 1551 CDD AAA 166 293 - -
Lele51g0254 1551 SMART AAA_5 175 327 IPR003593 -
Lele51g0254 1551 SMART AAA_5 904 1054 IPR003593 -
Lele51g0254 1551 PRINTS Disease resistance protein signature 1071 1085 - -
Lele51g0254 1551 PRINTS Disease resistance protein signature 983 997 - -
Lele51g0254 1551 PRINTS Disease resistance protein signature 907 922 - -
Lele51g0254 1551 PRINTS Disease resistance protein signature 1457 1473 - -
Lele51g0254 1551 Coils Coil 849 869 - -
Lele51g0254 1551 FunFam Probable disease resistance protein At5g04720 489 669 - -
Lele51g0254 1551 Gene3D - 1036 1115 IPR042197 -
Lele51g0254 1551 SUPERFAMILY L domain-like 1205 1512 - -
Lele51g0254 1551 FunFam Probable disease resistance protein At5g04720 1280 1455 - -
Lele51g0254 1551 Gene3D - 862 1029 IPR027417 -
Lele51g0254 1551 Gene3D - 137 301 IPR027417 -
Lele51g0254 1551 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 727 1546 IPR039203 GO:0050832
Lele51g0254 1551 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 362 IPR027417 -
Lele51g0254 1551 Gene3D - 354 437 IPR036388 -
Lele51g0254 1551 Gene3D - 1118 1213 IPR036388 -
Lele51g0254 1551 Gene3D Ribonuclease Inhibitor 1241 1529 IPR032675 -
Lele51g0254 1551 Gene3D Ribonuclease Inhibitor 438 720 IPR032675 -
Lele51g0254 1551 SUPERFAMILY RNI-like 493 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0254 Lele-ChrLele51 1433457 1442751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0254 1404 1512 Receptor kinase-like Gene Family AT1G28440 30.909 5.13e-06 49.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0243 49 1412918 1417514 Lele51g0254 51 1433457 1442751 hybridization
Lele50g0256 50 1487317 1492315 Lele51g0254 51 1433457 1442751 hybridization