Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0250 ATGGAGAAGTGGGCCCACGAACCACGGGGCAGAAGGCAGAGAAGGGCATTGACGGCGACTATAGTAAGTGCCCGCACTGCCCGCGTTGCCCGACATGGGCATCAAAACTCAAAAAGGGACATCGTATTTTGTCGTCTTTCGACAGAGCCGTCATCCACAAAGATCATAAAGAAGATGATCCAGGAACTGTTGAGCGGTGCTGGTCTCATTGCAGGCGAAAGGAAAATCTCCACTAGCGGAGCAGCCGCAGTTTTGCCGCTCATCACTACGTCTCATACTTCTGTTCCTTCTTCTTCTTCATCTCATCACCCTTCAACCCCCATCACTACTTCTACCACCACCGCCGCTGCAGCTGCAGCCACATCCACAAATTCCGAGAACCAAAATCTGAGGTGCCCGCGGTGTGATTCTTCCAACACAAAGTTCTGTTACTACAACAACTACAACCTCACTCAGCCTCGCCACTTCTGCAAGACATGTCGCCGGTACTGGACCAAAGGTGGTGCTCTCAGGAATGTTCCAATCGGCGGTGGTTGCCGGAAGAACAGGAACGTTGGCGCCTCCAACTCCGTTGTGAAGACAAGCGTGGCTAAGATGAAAACAGCTGCACCATCGGAGCTTGAAAGGTCGGTGCTCGGGGTGGCCGGGTTCATCGACCACGACCTTTCTTCAAACCCGATTCTATGGGGCTCGCCGCAAAATTCTCACGTGTTAGCTCTGCTGAGAGCTGGTCAAAACCATAACCCTAACCCTAACCCTAGTCTTCCCATGTCTGTCAATGCTGTTAAAGAAGGAGGGAACTTGATGGTGTCCCACACGGTGACTGAGCCAGTGGTTGGAAATGGGTTGGTTAATGGTCGAGCCCTAAACTTCGATTCTGTTGGTCAATTTCCCACAATTGGGCCCCGCAGCTCTATCTGGAGAAGCAGTAATAGTAATAACAATAATCAAGATGGGTTCTTAGCTGGAGAACATGAGGGCAGGGGAATTCAAGAACTGTACCAGAGGCTGAGATCATCAACATCAGCAGCTAATTTTTATTGCAGCAACAATAATAACTCATCCCAGGTCTTGGGGAACATGGCTTCTTCTTCACACGCATCTTCTTCTTTATCAGCTAATTTGGGGTCAGCTCCAGTAGTCGCTGGGGATGATCAATTGGGGTACACCTGGAATCCAACTCTTTCGTGGTTTGATCTTTCCACCACCAATGGTACTTTATATCCTTAA 1230 0.4984 MEKWAHEPRGRRQRRALTATIVSARTARVARHGHQNSKRDIVFCRLSTEPSSTKIIKKMIQELLSGAGLIAGERKISTSGAAAVLPLITTSHTSVPSSSSSHHPSTPITTSTTTAAAAAATSTNSENQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNRNVGASNSVVKTSVAKMKTAAPSELERSVLGVAGFIDHDLSSNPILWGSPQNSHVLALLRAGQNHNPNPNPSLPMSVNAVKEGGNLMVSHTVTEPVVGNGLVNGRALNFDSVGQFPTIGPRSSIWRSSNSNNNNQDGFLAGEHEGRGIQELYQRLRSSTSAANFYCSNNNNSSQVLGNMASSSHASSSLSANLGSAPVVAGDDQLGYTWNPTLSWFDLSTTNGTLYP 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0250 409 MobiDBLite consensus disorder prediction 92 130 - -
Lele51g0250 409 Pfam Dof domain, zinc finger 128 184 IPR003851 GO:0003677|GO:0006355
Lele51g0250 409 ProSiteProfiles Zinc finger Dof-type profile. 130 184 IPR003851 GO:0003677|GO:0006355
Lele51g0250 409 ProSitePatterns Zinc finger Dof-type signature. 132 168 IPR003851 GO:0003677|GO:0006355
Lele51g0250 409 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 119 335 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0250 Lele-ChrLele51 1412279 1418314 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0250 90 194 C2C2-Dof Transcription Factor Family AT5G65590 56.190 3.47e-35 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele51g0250 zf-Dof 1.2e-31 No_clan