Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0244 ATGGCGTGGATGAAATTTGATTACAAGATTGTGATTGTGTTTCTAGTTTTAGCTGTGAATGTGAGCTATCGTGGAGATGCGGCCAAGAATGGGAGTTTAGGAGCTTCATTCATATTTGGGGACTCCTTGGTGGACGCTGGAAACAACAACTATCTATCAACTCTGTCAAGGGCAAACATGACACCCAATGGAATTGATTTTAAGGCCTCCGGTGGAAACCCCACCGGCCGCTTCACCAACGGACGAACCATTGCTGATATTGTTGGAGAGAAACTGAGGCAACCAAATTATGCTGTGCCGTTCTTGGCTCCAAATGCAACTGGCAAAGCTATACTATACGGAGTGAATTACGCTTCTGGAGGAGGAGGCATTCTCAATGATACAGGAAGTATATTTGTGAATAGGCTGGGAATGGATGTTCAGGTAGACTACTTTACCATAACAAGGAAAGAGATAGATAAGTTGCTGGGAAAATCAAGGGCAAGGGAGTTCATAATGAAGGAATCCATGTTCTCCATCACAGTGGGATCGAATGATTTTCTCAACAATTATCTTCTCCCACTCGTCTCCATTAGAGCAAGAATTTCTGAAAGCCCAGATGCTTTCGTCGACGATATGATTAATCACTTCAGAACCCAACTGACGAGACTTTACCGGCTGGATGCTCGGAGATTTGTGGTGGCGAGCGTTGGTCCGATAGGGTGCATACCTTACCAGAAGACCATAAATCGGCTGGATCAAAATGAGTGCACGGATTTGGCAAACAAGCTTGCAGTTCAATATAATGGTCGATTAAAGCATTTGCTTGCCGAACTAAATGACGACCTCCCCGGAGCCACGTTCGTGCTTGCCAACGTGTACGATCTCGTGATGGAACTTATCACAAATTATGCGAAATACGGATTTAGAACAGCAAGTGCAGCATGCTGTGGAAATGGAGGGCAGTACGCAGGGATAATTCCATGTGGGCCGACGTCAAGCTTGTGCACGGACAGGTACAAGCATGTGTTCTGGGATCCATACCATCCGAGTGAAGCTGCCAACGAAATGCTCGCCGATCAGCTGGTTGACGGAGACACCAGATTCATTTCTCCCATGAATCTTCGCCAGCTTCGAGACCTTTAG 1125 0.4622 MAWMKFDYKIVIVFLVLAVNVSYRGDAAKNGSLGASFIFGDSLVDAGNNNYLSTLSRANMTPNGIDFKASGGNPTGRFTNGRTIADIVGEKLRQPNYAVPFLAPNATGKAILYGVNYASGGGGILNDTGSIFVNRLGMDVQVDYFTITRKEIDKLLGKSRAREFIMKESMFSITVGSNDFLNNYLLPLVSIRARISESPDAFVDDMINHFRTQLTRLYRLDARRFVVASVGPIGCIPYQKTINRLDQNECTDLANKLAVQYNGRLKHLLAELNDDLPGATFVLANVYDLVMELITNYAKYGFRTASAACCGNGGQYAGIIPCGPTSSLCTDRYKHVFWDPYHPSEAANEMLADQLVDGDTRFISPMNLRQLRDL 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0244 374 CDD SGNH_plant_lipase_like 35 359 IPR035669 -
Lele51g0244 374 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 35 371 - -
Lele51g0244 374 SUPERFAMILY SGNH hydrolase 39 356 - -
Lele51g0244 374 Pfam GDSL-like Lipase/Acylhydrolase 37 354 IPR001087 GO:0016788
Lele51g0244 374 Gene3D SGNH hydrolase 23 358 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0244 Lele-ChrLele51 1384964 1386504 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0244 35 371 Acyl Lipid Metabolism Gene Families AT4G10950 34.615 5.02e-67 215
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0230 49 1360214 1365108 Lele51g0244 51 1384964 1386504 hybridization
Lele50g0241 50 1434918 1436675 Lele51g0244 51 1384964 1386504 hybridization