Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0240 ATGCAGCTCCGTGCATCTAATCTTTTGAAGTCAGAGGAGCCGATCTCCTACCGTAATCAGATGGTGCATTTGAAACCGCTTGCACTAGCACTTGCTATTCCTGAAAAGCTGATGGCTATGGCGGAAAACCGCTTAGAAATGGGGCAAACTGGAGAAAGATGCAGAGCGTTGGAAAGACATATATATTGGACAGAATTCGCTCCCAACAGGCACCAATTTTTCAAGCTAATGATGGGTGATTTCAGGAACCAGCTGGTTTCAGAAGCTACAGGTATTGATGGATTCTCATCTCTTCTACAGCGAATTCCAAGAAAATTCGTTAGTCATTTTAAGGAGGAACTGCTGGGTACTGTAAGACTTATAGGGCCGAGTAGAAATGTGTGGAATGTGAACATTGCAAGAACGGATGACGATATCATTTTTCAGATTGGTTGGGGAAAATTCGTGCAGGATCACAGTTTAGCGGAAAGAGATTTTCTTGTCTTCCACTACATTGGATACTCTTCTTTCAATGTCTCCATTTTTGATGAAACAGGATGCGAAAGAGAAGGTGCTTTTTTCATCAAGAAACACATTTCGTGCAATAGAAATGCTTGCTTTCTTCAAAATGAAGAGAACATCCTGCAAACTACTGGTGTGGAAGAAATGAAAGGAAGAGATGGCGCGAGAGGAGAGGTGCGAGAAAGAAACCTGAAAAGCAAAACTGGTATGCTCGTTGGAACCAGGTTTGAGGCCAAAAATTCAGACATGAAAACTTTTGGTGCTGGGAAAGAAGACCTCCGGCCAAAAAGAGAAGGTAACACAGCCCAGGAGACCGAATTTGTTGACTTGACCTCTTCAAGAAAGGAGTTGAAAATCCGTCAACATCGGCTTAAGCAAGTTAAATGA 888 0.4257 MQLRASNLLKSEEPISYRNQMVHLKPLALALAIPEKLMAMAENRLEMGQTGERCRALERHIYWTEFAPNRHQFFKLMMGDFRNQLVSEATGIDGFSSLLQRIPRKFVSHFKEELLGTVRLIGPSRNVWNVNIARTDDDIIFQIGWGKFVQDHSLAERDFLVFHYIGYSSFNVSIFDETGCEREGAFFIKKHISCNRNACFLQNEENILQTTGVEEMKGRDGARGEVRERNLKSKTGMLVGTRFEAKNSDMKTFGAGKEDLRPKREGNTAQETEFVDLTSSRKELKIRQHRLKQVK 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0240 295 CDD B3_DNA 73 176 IPR003340 GO:0003677
Lele51g0240 295 ProSiteProfiles B3 DNA-binding domain profile. 85 178 IPR003340 GO:0003677
Lele51g0240 295 MobiDBLite consensus disorder prediction 252 274 - -
Lele51g0240 295 Gene3D - 66 180 IPR015300 -
Lele51g0240 295 Pfam B3 DNA binding domain 95 177 IPR003340 GO:0003677
Lele51g0240 295 SMART B3_2 95 178 IPR003340 GO:0003677
Lele51g0240 295 SUPERFAMILY DNA-binding pseudobarrel domain 99 180 IPR015300 -
Lele51g0240 295 PANTHER B3 DOMAIN-CONTAINING 68 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0240 Lele-ChrLele51 1359328 1360917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0240 47 190 REM Transcription Factor Family AT4G33280 37.671 4.31e-23 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele51g0240 B3 4.9e-15 CL0405