Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0224 ATGGAAGTGCTTCCGTGTTCTGGTGTTCAATATGCTGCAGAATCTGAGGGCCCTCAACAAAGTTCAGTAACATCTTTTGTTTATGAGGGAGAACCTAATTGCTCTGAAAATGGTGAACGAGTTGAGTTGGAGGATGGTCAACGTAATGATTCATTACTTAAAATGAAAGGCCCTCAGGTGGAAGGGCAGGGTGAAGTTCAAGAGGCAGTTGGCAAACTGTCGGTTAATCCGGATTGGCAGTGCAGTGCAACTTCAAATTGTGAATGTCGAGCCGTAGATCAAAAGGAATCTTCTAGTTTCCTTGCTTTTGATGAGGATGAGGTAGATGAACCTTGCTTAAACTCAGAGAACCCTATTCACTTTGTGGATGCAATTGAAAGTGAATCACCAAACAACAGTAGGGATGGAGAGTTACCACTTGCTGAACCTAGTTGGCTCGAGGGGGATGAGTCTGTGTCATTGTGGGTCAAGTGGAGAGGGAAGTGGCAGGCTGGCATCAGATGTGCAAGGGCTGATTGGCCCTTATCAACTTTGAAAGCAAAACCTACGCATGGCCGGAAGAAATATTTTGTGATATTTTTTCCGCACACAAGGAATTATTCTTGGGCTGACATGATGCTTGTTTGTTCAATTAATGAGTTTCCCCAGCCCATCGCATATAAGACCCATCAAGCAGGATTGAAAATGGTGAAGGATTTGTCTGTTGCCCGACGGTTTATAATGCAAAAGCTAGTTGTTGGGATGCTGAACATCGTTGATCAATTTCACCTAGACGCTTTAATTGAAGCTGCTCGTGATGTGATGTTCTGGGAGGAGTTTGCGTTGGAGGCTTCCAAAAGTAATGGTTATTCTGATCTGGGAAGAATGCTTCAAAAGCTTCAAAATAGCATAATGCAGCGCTACATAAATGCTAACTGGTTACAACATTCTTTTCCCATGTGGATTGATCGATGCCAGAATGCAAATAGTGCTGAATTGGTAGAACTGCTAAAGGAGGAATTGTTTGATTCTATATTGTGGAATGATATCAGCACTCTATGGGGTGCTCCAGTGCAACCAATATTAGGTTCTGAGTGGAAAACGTGGAAGCATGAAGTGATGAAATTGTTTTTTACCTCTACTTCATTATATAGCAGCAAAGACATGCAACAGCAGCAGACCTCTGATGGCCCCTTCCAAACAAGCCTCCAAGTTTGTCGAAAAAGACCCAAGCTTGAAGTTCGTCGTGCAGACATACATGCTTCACAAGTAGAAACTAAGGGTTCAGATCACTCTATCGCACTTGAGACTGACCCGGGCTTCTTTAGTAATCAGGACACAGTGAATACATTAGCATCTGAGACTTGTAAACAGGAGGAACTTAGGGAGGCACCTATTCCAATTGATTCACCTGGTAATTTAGCAAACAAATGGAATGACCTTCTTGTTGAATCTGCTGCAGATTCTGAGTTCTTGCATACCAAAGCTATGGAATCAACATCTACCAATGAAATGGTTGGTCCCAAATCTGTAGAACCTGGTGGTAAGAATCGACAATGTGTGGCTTACATAGAAGCCAAGGGAAGACAGTGTGTGAGATGGGCAAATGATGGTGATGTTTACTGTTGTGTGCATTTGTCCTCTCGGTTTTTAGGCAGCTCTGCCAGAGAAAGACCTGTTTCAGTTGATGCTCCTATATGTGAAGGCACAACTGTTCTTGGCACCAGATGCAAGCATCGGGCCCTTCCTGGCTCTTCATTCTGTAAGAAACACAGGCCCCTTGCTGGAACAGACCACACTCCAAATTTACCCCCGACTTCCCTAAAGAGGAAGCATGAAGAAAATTACACTGGTTCGGAGAGCATGTTCTGCAAAGACATAGTACTGGCAGATGCTGAAGGTCCTTTGCAAGTGGATCCAGTTTCAGCCATGGATGATGATACCTTCCATGGAAACATTAACTTGAATGGGAAACCCATGCATTCCGGAAATGATCATAATGCAATGGAGGAACATCGCTGTATAGGCTTGTCTCCCTTTGATGACAAGAACCCCTGTTTGGAAACTCCAAAGAGGTACTTCTTGTATTGTGAAAAGCACTTGCCAAGTTGGCTCAAACGTGCGCGAAATGGGAAGAGTAGAATAATTTCAAAAGAAGTGTTTGCAGAACTTCTGAGGGAATGCTTCTTACAGGAGCAGAAAGTAAATCTACATAAAGCATGTGAGCTTTTTTACAGGCTATTTAAAAGCATTTTATCCCTAAGAAACCCTGTTCCTAAAGAAGTTCAATTCCAGTGGGCTTTGACTGAAGCTTCTAAAGACATTAGTGTCAGAGAATTCTTTAAAAAGTTGGTTCATAGTGAAAAAGAGAGAATCAAAATGATCTGGGGATTCAACGATGACAAAGATGCGCCTTCACTCATGGAAGAAATACCTCAGTTGCCATCCACCGTTAATGATAGCTTTGTTAATGAAAATGTCAATGTGTGTAAGATATGCTCTGCAGAATTTCCTGATGACCAAGCACTTGGCAGCCATTGGATGGAAAACCATAAAAAGGAATCACAGTGGCTGTTTAGAGGTTATGCATGTGCTATTTGCCTGGATTCTTTTACCAACAAGAAAGTCTTGGAAAACCATGTCCAGGAGAGACACCATGTGCAATTTGTTGAACAATGTATGCTTTTGCAGTGTATTCCTTGTGGTAGCCATTTTGGAAATACTGAACAACTATGGCTGCATGTTCTATCAGTTCATCCTGTTGATTTTAAGGCATCAAAAGCTCCTGAGCAGCAAACTTTGTCTACTGGCGAGGACTCTTCAATACAACTAGAAGCAGAGCAAGTAAACTCAGCCTCTCTGGAGAATAATTTGGAGAATTCAGGTGGTTCACGGAAGTTTATTTGTAGGTTCTGTGGATTAAAGTTTGATTTACTACCTGACCTTGGTCGCCATCATCAAGCTGCTCATATGGGGCCTAATTTAGTTAGCAGCCATCCCTCAAAAAAGGGAGTTCGTTATTATGCATATAGATTAAAATCTGGTAGACTTAGTCGTCCTAGATTCAAAAAGAGTTTGGTGTCAGCATCACATCGGATCAGAAGTAGAGCTAGTGCCAATTTAAAGAGACGCTTTCAAGCCACAAAGTCGCTTGGCATTGGGGGAATAACTATACAACCTCAAGTAACCGAGACAACAAATATTGCTAAGTTACCAGCATATCAATGCTCTGTTGTTGCCAAGATTTTGTTTTCTGAGATCCAAAAGACTAAACCTCGGCCAAACAATCATGATATTATATCAATTTCTCGCTCTGCCTGCTGCAAAGTTGGCCTTCAAGCTGCACTGGAGGAGAAATTTGGAACTCTGCCTGAAAAGCTGTATCTGAAGGCTGCAAAACTTTGCAGTGAACATAATATTCTAGTGAGTTGGCACCAAGAAGGGTTTAATTGTCCTAGAGGTTGCAAGGCGTTGAGTGACCAACCTTTGCTTTCTCACTTAGCATCTCTTCCTAATGGTTTTGTAAGGCATGAGGCTTTAAATTTGTCAGATCCTGCAGTAGACGAGTGGGAGGTGGATGAGTTTCATTACACCATCAATTCGCACCATTTAAAACCAGAATCCTTGCAAAAGGCTATAGTCTTATGTGATGACATAAGCTTTGGGAAGGAATCAGTTCAAGTGATTTGTGTAGTAGATCAAGAACTTCGAAATTCACTTCATATGTGTGGGTCTAATGAACATGATACGAATCTTTCTATGCCATGGGAGAGCTTTACCTACATTACGAAGCCAATGCTTGATCAATCCCTGAATCTTGATTCAGAGAGTCTGCAATTGGGATGTTCCTGTTCATATTCTACTTGCAGTCCTGAAACTTGTGCTCATGTATACCTTTTTGATAATGACTATGAAGATGCAAGGGACATATTTGGAAAATCAATGCGTGGCAGATTCCCATATGATGAGAATGGTCGAATGATTTTGGAGGAAGGTTACCTCGTCTACGAATGCAACTATAGCTGCAGATGTAGTAAAACCTGTCGAAACAGAATTTTGCAAAATGGAGTTGGAGTTAAACTGGAAGTTTTTAAAACAGAGAAAAAGGGATGGGCTGTAAGGGCTGGTGAAGCCATCCTGCGGGGCACATTTGTGTGTGAGTACGTTGGAGAGGTTTTAAATGAGCAAGAGGCACATAACAGGCGCAAGAGGTATGGCATAGAAGGTTGCAGTTATTTCCTTGATATTGATGCTCATATTAATGACATGAGCAGATTGATTGAAGGACAAGGTCGATATGCTATTGACGCTTCTAGATATGGAAATGTCTCGAGGTTCATCAATCATAGCTGCTCGCCCAATCTTGTGAATCACCAAGTTCTTGTAGAAAGCATGGATTGTGAACGTACACATATTGGTCTTTATGCAAGTCGAGATATTGCACTGGGGGAAGAACTGACATATGATTATCATTATGAGCTTCTGCCTGGGGAAGGTTCTCCTTGCCACTGTGGATCTTTGAAGTGCCGGGGACGCCTTCACTGA 4524 0.4211 MEVLPCSGVQYAAESEGPQQSSVTSFVYEGEPNCSENGERVELEDGQRNDSLLKMKGPQVEGQGEVQEAVGKLSVNPDWQCSATSNCECRAVDQKESSSFLAFDEDEVDEPCLNSENPIHFVDAIESESPNNSRDGELPLAEPSWLEGDESVSLWVKWRGKWQAGIRCARADWPLSTLKAKPTHGRKKYFVIFFPHTRNYSWADMMLVCSINEFPQPIAYKTHQAGLKMVKDLSVARRFIMQKLVVGMLNIVDQFHLDALIEAARDVMFWEEFALEASKSNGYSDLGRMLQKLQNSIMQRYINANWLQHSFPMWIDRCQNANSAELVELLKEELFDSILWNDISTLWGAPVQPILGSEWKTWKHEVMKLFFTSTSLYSSKDMQQQQTSDGPFQTSLQVCRKRPKLEVRRADIHASQVETKGSDHSIALETDPGFFSNQDTVNTLASETCKQEELREAPIPIDSPGNLANKWNDLLVESAADSEFLHTKAMESTSTNEMVGPKSVEPGGKNRQCVAYIEAKGRQCVRWANDGDVYCCVHLSSRFLGSSARERPVSVDAPICEGTTVLGTRCKHRALPGSSFCKKHRPLAGTDHTPNLPPTSLKRKHEENYTGSESMFCKDIVLADAEGPLQVDPVSAMDDDTFHGNINLNGKPMHSGNDHNAMEEHRCIGLSPFDDKNPCLETPKRYFLYCEKHLPSWLKRARNGKSRIISKEVFAELLRECFLQEQKVNLHKACELFYRLFKSILSLRNPVPKEVQFQWALTEASKDISVREFFKKLVHSEKERIKMIWGFNDDKDAPSLMEEIPQLPSTVNDSFVNENVNVCKICSAEFPDDQALGSHWMENHKKESQWLFRGYACAICLDSFTNKKVLENHVQERHHVQFVEQCMLLQCIPCGSHFGNTEQLWLHVLSVHPVDFKASKAPEQQTLSTGEDSSIQLEAEQVNSASLENNLENSGGSRKFICRFCGLKFDLLPDLGRHHQAAHMGPNLVSSHPSKKGVRYYAYRLKSGRLSRPRFKKSLVSASHRIRSRASANLKRRFQATKSLGIGGITIQPQVTETTNIAKLPAYQCSVVAKILFSEIQKTKPRPNNHDIISISRSACCKVGLQAALEEKFGTLPEKLYLKAAKLCSEHNILVSWHQEGFNCPRGCKALSDQPLLSHLASLPNGFVRHEALNLSDPAVDEWEVDEFHYTINSHHLKPESLQKAIVLCDDISFGKESVQVICVVDQELRNSLHMCGSNEHDTNLSMPWESFTYITKPMLDQSLNLDSESLQLGCSCSYSTCSPETCAHVYLFDNDYEDARDIFGKSMRGRFPYDENGRMILEEGYLVYECNYSCRCSKTCRNRILQNGVGVKLEVFKTEKKGWAVRAGEAILRGTFVCEYVGEVLNEQEAHNRRKRYGIEGCSYFLDIDAHINDMSRLIEGQGRYAIDASRYGNVSRFINHSCSPNLVNHQVLVESMDCERTHIGLYASRDIALGEELTYDYHYELLPGEGSPCHCGSLKCRGRLH 1507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0224 1507 Pfam Pre-SET motif 1213 1344 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele51g0224 1507 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 1507 - -
Lele51g0224 1507 MobiDBLite consensus disorder prediction 1 23 - -
Lele51g0224 1507 SMART c2h2final6 821 844 IPR013087 -
Lele51g0224 1507 SMART c2h2final6 855 878 IPR013087 -
Lele51g0224 1507 SMART c2h2final6 960 983 IPR013087 -
Lele51g0224 1507 SMART c2h2final6 889 912 IPR013087 -
Lele51g0224 1507 Pfam SET domain 1363 1483 IPR001214 GO:0005515
Lele51g0224 1507 ProSitePatterns Zinc finger C2H2 type domain signature. 891 912 IPR013087 -
Lele51g0224 1507 ProSiteProfiles SET domain profile. 1352 1484 IPR001214 GO:0005515
Lele51g0224 1507 ProSitePatterns Zinc finger C2H2 type domain signature. 823 844 IPR013087 -
Lele51g0224 1507 Pfam Zinc finger C2H2-type, 3 repeats 857 984 IPR040689 -
Lele51g0224 1507 SUPERFAMILY SET domain 1201 1497 IPR046341 -
Lele51g0224 1507 SMART set_7 1352 1490 IPR001214 GO:0005515
Lele51g0224 1507 ProSiteProfiles Post-SET domain profile. 1491 1507 IPR003616 -
Lele51g0224 1507 ProSiteProfiles Zinc finger C2H2 type domain profile. 855 878 IPR013087 -
Lele51g0224 1507 ProSitePatterns Zinc finger C2H2 type domain signature. 962 983 IPR013087 -
Lele51g0224 1507 Gene3D SET domain 1201 1507 IPR046341 -
Lele51g0224 1507 Gene3D Classic Zinc Finger 821 879 - -
Lele51g0224 1507 ProSiteProfiles Zinc finger C2H2 type domain profile. 960 988 IPR013087 -
Lele51g0224 1507 SMART preset_2 1209 1336 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele51g0224 1507 ProSiteProfiles Pre-SET domain profile. 1273 1349 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0224 Lele-ChrLele51 1257819 1266158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0224 92 1506 C2H2 Transcription Factor Family AT2G23740 50.976 0.0 1389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele51g0224 Pre-SET 4e-15 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0224 51 1257819 1266158 Lele53g0085 53 655842 658577 CCT
Lele51g0224 51 1257819 1266158 Lele54g0087 54 727906 730658 CCT
Lele51g0224 51 1257819 1266158 Lele55g1410 55 20402876 20405624 CCT
Lele51g0224 51 1257819 1266158 Lele56g1344 56 16632593 16635574 CCT
Lele49g0210 49 1245828 1254119 Lele51g0224 51 1257819 1266158 hybridization
Lele50g0223 50 1323449 1331938 Lele51g0224 51 1257819 1266158 hybridization