Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0220 ATGGAGACCGGGAAGGTGACGGCATGGGAAGTTGGATTGTACATCAATGAATTTGCATGGGACCTCGTCGCAATGGATAGGGTTTTGAGGAGGGATATCCCATGGGAGACGTACATGAGCACTAAGTTGATCTCAGGCACAAGCCTTCAGCTCTTAAGGCGTTATGATCACAAATCACAAAGTCAAAGAGCACAGCTGTTGGATGATGATGGTCCAGCTTATGTACGTGTGTTTGTTCATGTTTTGCGTGATATACATAAAGATGAGACAGTGGAATATGTTCTGGCCTTAATAGATGAAATGCTTACAGCAAATCCAAAAAGAGCAAGGCTGTTTCATGAGAAGTCCCTTGCAGATGGACCTAAGACTTATGTTGAGTTGCAGCTGAGGAACCCTACTCATCCTAGTCGTGGTGTGCCAACTGCTATCAACTGTTTATCAACTCTTCTTAAGGAACCTATGGTTAGATCTTCCTTTGTTCAGGCAGGTGGGGTCAAGTTGCTTGTACCTTTGATTTCTCCAGCATCCACCCAACAGTCTATTCAGGTTGTTAGAGTAGTAATCTTAACTATCAAGAACTTGCAGTCAAAAGGGACATTGGGTGCTCAAATGGTTGACCTCCAGCTGCCACAAGTTATTCAGAGTTTGAAATCACAGGCATGGAGTGATGAGGACTTGCTTGAGGCGCTGAATTACCTGGAAGAAGGGCTTAAGGATAACATTAAGAAACTTAGTTCTTATGACAAATATAAGCAAGAAGTTCTCCTTGGCAATCTGGATTGGTCTCCCATGCACAAAGATCCTATATTTTGGCGAGAAAATATTACCAACTTTGAAGAAAATGACTTTCAGATTTTAAGAGTCCTACTATCAATTTTAGACACGTCGGGTGATCCAAGAAGTCTGGCTGTTGCATGCTTTGACCTTGCACAATTCGTCCAACATCATCCTGCTGGGAGAATCATAGTGACAGACCTTAAAGCCAAGGAAAGGGTAATGAAACTAATGAATCATGAGAACGCTGATGTCACTAAAAATGCACTGGTCTGCATCCAACGGCTCTTCTTAGGTGCCAAGTATGCAAGCTTTTTGCAGGCTTAG 1101 0.4287 METGKVTAWEVGLYINEFAWDLVAMDRVLRRDIPWETYMSTKLISGTSLQLLRRYDHKSQSQRAQLLDDDGPAYVRVFVHVLRDIHKDETVEYVLALIDEMLTANPKRARLFHEKSLADGPKTYVELQLRNPTHPSRGVPTAINCLSTLLKEPMVRSSFVQAGGVKLLVPLISPASTQQSIQVVRVVILTIKNLQSKGTLGAQMVDLQLPQVIQSLKSQAWSDEDLLEALNYLEEGLKDNIKKLSSYDKYKQEVLLGNLDWSPMHKDPIFWRENITNFEENDFQILRVLLSILDTSGDPRSLAVACFDLAQFVQHHPAGRIIVTDLKAKERVMKLMNHENADVTKNALVCIQRLFLGAKYASFLQA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0220 366 Pfam V-ATPase subunit H 243 355 IPR011987 GO:0000221|GO:1902600
Lele51g0220 366 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 125 183 IPR004908 GO:0000221|GO:0046961|GO:1902600
Lele51g0220 366 SUPERFAMILY ARM repeat 25 356 IPR016024 -
Lele51g0220 366 Gene3D - 257 358 IPR038497 -
Lele51g0220 366 Gene3D - 23 130 IPR011989 -
Lele51g0220 366 Gene3D - 182 245 IPR011989 -
Lele51g0220 366 FunFam V-type proton ATPase subunit H 257 358 - -
Lele51g0220 366 Pfam V-ATPase subunit H 181 237 IPR004908 GO:0000221|GO:0046961|GO:1902600
Lele51g0220 366 Pfam V-ATPase subunit H 26 118 IPR004908 GO:0000221|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0220 Lele-ChrLele51 1224789 1230588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0220 23 366 Primary Pumps ATPases(2) AT3G42050 60.780 0.0 513
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0205 49 1208579 1214354 Lele51g0220 51 1224789 1230588 hybridization
Lele50g0218 50 1285007 1293796 Lele51g0220 51 1224789 1230588 hybridization