Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0201 ATGAAGCATCAAAGAGATTTGCTGGCTTCGCCATTTTCATTTCTCTGGTTCTTCTTGTTCCTCACTCCTCCCTTGTATGGCAAGGCTTCGAGTTCTTCTGAGAATGTGACGAAGGAAGAAAAGAGTCCAGTGATAGGGAAATCTGAGTGGAGAAGAATAACAAGCACTGAACATGGAGAAGTGTCCACCATTGACGTAAAAGATGGACACAGATCACCCTTCCATCTTCAGTTATTTACACTCGAACCCAACTCTCTCTTCCTTCCTGTTCTTCTTCATGCAGACATGCTCTTCTACGTTCACACAGGGAGTGGAAGGCTGATTTGGGCATATGATGGTGATACTAAAAGGATAAATCTACGCCAAGGTGACATCTGCATGCTTGGAACAGGCCATGTTTTCTATTTACAGAGCAACCTGGAGGCACAAAGACAGAGACTTCGGATTTTTGCAATTTTTCCCAACTCGATTCATAACCATTACGACGCAGCAATTGGTGCTTATTCCAGAATCAGTGAACTGGTGGGAGGCTTCGATCAGAAAATCATGCAAGCAGCTTTTGGGGTGCCGGAGGAGCTAGCTGCAGAAATTTCAAACAAAACTGAGCCCCCTGCAATAGTGCATGCTGTTTCGAAGGAGAAAAACAATATATTGGAATTGGAGGCTTGGATTCTAAACAGAGTATTAGGTGGTGAGATTGCCACTGACGTGTCCTCCAACAACAATAAACTCCGGACATTTAATGTCTTCCACAAACATCAGGATTTCCAGAACCGTTATGGATGGAGCCTCATGGTGACCCAAAAACATTTGAAATCATTGAAGCATATCAACATTGGCTTCCTGATGGTGAATTTGACCGCGGGAGCAATGATGGGGCCACACTGGAATCCACTGGCAACAGAGATAGCAATGGTATTGGAAGGGGAAGGCATGGTTCGTGTGGTATGTGGGAGCAGCAATATGGACAAGTCCAAATGCCAGAACATGAGGTTTAAGGTGAAGCAGGGAGATGTTTTCATGGTTCCTAGGTTTCATCCAATGGCTCAGATGTCTTTCAACAATGACTCTCTGGTTTTCCTGGGCTTTAGTACCACAACGAAGAAGACCTATCCTCAATTTTTAGCGGGAGAGAGATCAGTGCTACAGACCATAGATAAGCACATATTGGCTGCATCATTCAATGTGAGTGACGAAGCAATTAAGCAACTTTTGCATTCTCAGGAAGGATCCATCATATTAGGGTGTGCATCATGCGCAGAGGAAAGGATCATGATAGAAGAAGCCAAAAGGAGGGAAGAGGAAAGAAGGAGAGAAGAAGAAGCACGGAGAAAAGAAGAGGAGAAGAGGAGACAGGAAGAGGAGAAAAGGAGAGAGAAGGAGGAAGCTAGAAGAGAGGCAGAAGAAGAGCAAAAGAGAGAAGAAGAAAAAGCAAAGGAAGAGCAAGAAGGGGCTAAGAGACAACAAGAAAGAAGGGAGGAAGAAAGGAGGAGGGAAGAAGAAAAGGCAAGAAGGCGACGAGAGGAAGAAGCAAAAAAGGAACAAGAACGAACAACAAGACAAGAAGAAGAAGAAGCAGAAAGGGAGCGAGGGCGAGCTAGAGAGGAACAAGAAGAAAGGCAAAGGAGGCGACAAGAGGAGGAAGCAAAAGAGGAGCAAGAACAAGCTAGAAGGAAGAAAGAAGAAGCAGCAGAAATGGAGCAAGAACGAGCTACAAAGGAACAAGAAGAAAGGGAAAGGAGGCGTCAACAAGAAGAAGCAAAAGAGGAGCAAGAAGAAGAAGCAGAAATGGAGCAGGAACGAGCTAGAAAGGAACAAGAAGAAAGGGAAAGGAGGCGTCAACAAGAGGAAGAAGCAGAAGAAGAGCAAGAACAAATTAGGAGACAAGAAGAAGAAGCAGCAAAGGAGCAAGAGCGAAGTAGAAAGGAACAAGAAAGGGAAATGAGGCGTCAAAAGGAAGAAGCAGAAGAAATGTTACAACAAGCAAGGAGACACAGAGAAAAAGAAGCAAAAAAGGAGCAACAGGGAGCTAGAAAGGAACAAGAAGAAAGGGAAAGGAGGCGTCAAAAGGAAGAAGCAGAAGAAGAGCAAGAACAAGTTAGGAGACAAGAAGAAGAAGAAGCAACAAAGGAGCAAGAGCGAAAAAAAGAAGCAAAAAGGGAGCAGGAGCGAGTTAGAAAGGAACAAGAAGAAAGGGAATGGAGGCATCAAAAGGAAGAAGCAGAAGAAGTGCAAGAACAAGTTAGGAGACAACAAGAAGAAGAAGCAACAAGGGAGCAGGAGCGAAGTAGAAAGGAACAAGAAGAAAGGGAAATGAGGCGCCAAAAGGAAGAAGCAGAAGAAATGCAAGAACAAGCAAGGAGACACAGAAAAAAGAAGCAAAAAAGGAGCAAGAGCGAGCTAGAAAGGAACACGAAGAAAGGGAAAGGAGGCATCAAAAGGAAGAAGCAGAAGAAGAAGCAAGAAGGGAGCAAGAGCAAGGTAGAGAGGAACATTAAGAAAGGGAAAGTAGGCGTCAAAAGTAAAATAGACATGCTACGATAA 2544 0.4422 MKHQRDLLASPFSFLWFFLFLTPPLYGKASSSSENVTKEEKSPVIGKSEWRRITSTEHGEVSTIDVKDGHRSPFHLQLFTLEPNSLFLPVLLHADMLFYVHTGSGRLIWAYDGDTKRINLRQGDICMLGTGHVFYLQSNLEAQRQRLRIFAIFPNSIHNHYDAAIGAYSRISELVGGFDQKIMQAAFGVPEELAAEISNKTEPPAIVHAVSKEKNNILELEAWILNRVLGGEIATDVSSNNNKLRTFNVFHKHQDFQNRYGWSLMVTQKHLKSLKHINIGFLMVNLTAGAMMGPHWNPLATEIAMVLEGEGMVRVVCGSSNMDKSKCQNMRFKVKQGDVFMVPRFHPMAQMSFNNDSLVFLGFSTTTKKTYPQFLAGERSVLQTIDKHILAASFNVSDEAIKQLLHSQEGSIILGCASCAEERIMIEEAKRREEERRREEEARRKEEEKRRQEEEKRREKEEARREAEEEQKREEEKAKEEQEGAKRQQERREEERRREEEKARRRREEEAKKEQERTTRQEEEEAERERGRAREEQEERQRRRQEEEAKEEQEQARRKKEEAAEMEQERATKEQEERERRRQQEEAKEEQEEEAEMEQERARKEQEERERRRQQEEEAEEEQEQIRRQEEEAAKEQERSRKEQEREMRRQKEEAEEMLQQARRHREKEAKKEQQGARKEQEERERRRQKEEAEEEQEQVRRQEEEEATKEQERKKEAKREQERVRKEQEEREWRHQKEEAEEVQEQVRRQQEEEATREQERSRKEQEEREMRRQKEEAEEMQEQARRHRKKKQKRSKSELERNTKKGKGGIKRKKQKKKQEGSKSKVERNIKKGKVGVKSKIDMLR 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0201 847 SMART Cupin_1_3 247 402 IPR006045 -
Lele51g0201 847 SMART Cupin_1_3 52 195 IPR006045 -
Lele51g0201 847 MobiDBLite consensus disorder prediction 822 847 - -
Lele51g0201 847 MobiDBLite consensus disorder prediction 597 787 - -
Lele51g0201 847 CDD cupin_7S_vicilin-like_C 255 411 - -
Lele51g0201 847 MobiDBLite consensus disorder prediction 430 847 - -
Lele51g0201 847 Gene3D Jelly Rolls 34 219 IPR014710 -
Lele51g0201 847 Pfam Cupin 51 190 IPR006045 -
Lele51g0201 847 Pfam Cupin 247 401 IPR006045 -
Lele51g0201 847 SUPERFAMILY RmlC-like cupins 74 409 IPR011051 -
Lele51g0201 847 Gene3D Jelly Rolls 238 415 IPR014710 -
Lele51g0201 847 MobiDBLite consensus disorder prediction 430 588 - -
Lele51g0201 847 Coils Coil 417 796 - -
Lele51g0201 847 PANTHER OS03G0336100 PROTEIN-RELATED 16 419 - -
Lele51g0201 847 CDD cupin_7S_vicilin-like_N 53 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0201 Lele-ChrLele51 1136982 1140277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0201 11 421 Miscellaneous Gene Families AT2G18540 44.159 3.09e-108 347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0201 51 1136982 1140277 Lele53g0065 53 507987 510883 CCT
Lele51g0201 51 1136982 1140277 Lele54g0067 54 549235 552359 CCT
Lele51g0201 51 1136982 1140277 Lele55g1432 55 20557656 20560563 CCT
Lele51g0201 51 1136982 1140277 Lele56g1364 56 16800036 16802914 CCT
Lele49g0185 49 1112318 1114949 Lele51g0201 51 1136982 1140277 hybridization
Lele50g0201 50 1184881 1186986 Lele51g0201 51 1136982 1140277 hybridization