Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0200 ATGACTGCATCAGCATCGGCACAATCCCAGGAAATCTGCACTTTGCGTCATTATGACATCTTATTCATTCTTTTCAGTACCCTCTTCCTTCTGAAAATCCGCTCTTCCGCTCTATTTATAGCGTGCTTCCTCACTTCCCTATCTGGCACTACTCACCGTCCTTCAACCCCTGCACCTTCAAGAGAACCAATGGCTGCTTCAACTTCCAAAGCTTTCTTGGGAGATCATATCCATGTGGATGATATCGTCACAAGTTGCAGCAATGCACTAGACCTCGTCACGAAGCATACTGGTGTTTACTTCAAAGACAGAAGTCGTAAAGGTTGCCTGCGAGCTAGTGTGGATATTAGAAGGCCAGAACCGTTGAATGGTCCTCTAAGTTCTCGGTATTCCATTTTTTATGATAATTGGAGGAAGCAGAACTATAGCTTGCGTCATGGACCATGGCAGAAGAACATGTCTGTTACCTCTCCTGCTTGCTTCTCAGCCGGGGCTGCACAAGAAGTCTCATGTGATGGCAGCACTCCTGATGACCAACTTGCAAATTCTTCACTTTCTCCTGAGCAACCCATTGGAAGCGAGGGGACCTTGAAGCTGGTTTCAGGATCATGTTATCTACCTCATCCAGCTAAGGAGGACACGGGTGGAGAGGATGCTCATTTTATTTGCACAGAAAGACAAGCAATCGGCGTCGCAGATGGGGTAGGAGGCTGGGCGGATGTTGGTGTTAATGCAGGAATTTTTGCCCGTGAACTCATGTCTAATTCAGTCAGAGCAATTCAGGAGGAGCCACAAGGTCCTATCGATCCGTTGAGGGTGTTAGAGAGGGCTCACTCATGTACAAACGCCAAGGGCTCATCAACAGCTTGTATCATTGCCCTTAATGATAAGGGACTACATGCTATTAATCTGGGTGACAGTGGATTCGTTGTGATTAGAGATGGACGCACCATTTTCAAGTCCCATTTTCAACAGCATGGCTTCAATTTTACATATCAATTGGAAAGTGGCAATGGAGGCGATCTACCTAGCTCTGGCGAGGTTTGTGCGATGCCTGTTGACCCGGGAGATGTTGTCATTGCTGGAACCGATGGACTATTTGACAACTTGTACTGCAATGAGATTACTGCGATTGTTGTAGAGGCAGTAAGGGATGGATTAGAACCCCAAATAGCTGCTCAGAAGATAGCAGCACTAGCTCGGCATAGGGCACAAGACCGGAATCGACAGACACCATTTTCGACTGCTGCTCAAGAGGCTGGGTTCCGCTATCATGGTGGCAAGCTTGATGACATTACAGTTGTTGTATCCTACATAACAGAAATCAATTAG 1332 0.4677 MTASASAQSQEICTLRHYDILFILFSTLFLLKIRSSALFIACFLTSLSGTTHRPSTPAPSREPMAASTSKAFLGDHIHVDDIVTSCSNALDLVTKHTGVYFKDRSRKGCLRASVDIRRPEPLNGPLSSRYSIFYDNWRKQNYSLRHGPWQKNMSVTSPACFSAGAAQEVSCDGSTPDDQLANSSLSPEQPIGSEGTLKLVSGSCYLPHPAKEDTGGEDAHFICTERQAIGVADGVGGWADVGVNAGIFARELMSNSVRAIQEEPQGPIDPLRVLERAHSCTNAKGSSTACIIALNDKGLHAINLGDSGFVVIRDGRTIFKSHFQQHGFNFTYQLESGNGGDLPSSGEVCAMPVDPGDVVIAGTDGLFDNLYCNEITAIVVEAVRDGLEPQIAAQKIAALARHRAQDRNRQTPFSTAAQEAGFRYHGGKLDDITVVVSYITEIN 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0200 443 ProSiteProfiles PPM-type phosphatase domain profile. 203 439 IPR001932 -
Lele51g0200 443 SUPERFAMILY PP2C-like 205 436 IPR036457 -
Lele51g0200 443 SMART PP2C_4 190 437 IPR001932 -
Lele51g0200 443 SMART PP2C_SIG_2 199 439 IPR001932 -
Lele51g0200 443 MobiDBLite consensus disorder prediction 171 192 - -
Lele51g0200 443 MobiDBLite consensus disorder prediction 171 191 - -
Lele51g0200 443 Gene3D - 342 442 IPR036457 -
Lele51g0200 443 PANTHER PROTEIN PHOSPHATASE 2C 178 441 IPR039123 -
Lele51g0200 443 Gene3D - 209 334 IPR036457 -
Lele51g0200 443 FunFam 5-azacytidine resistance protein azr1 208 333 - -
Lele51g0200 443 Pfam Stage II sporulation protein E (SpoIIE) 226 437 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0200 Lele-ChrLele51 1130663 1136197 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0068 53 527291 528737 Lele51g0200 51 1130663 1136197 CCT
Lele54g0069 54 567751 569204 Lele51g0200 51 1130663 1136197 CCT
Lele55g1429 55 20539376 20540845 Lele51g0200 51 1130663 1136197 CCT
Lele56g1362 56 16778111 16779582 Lele51g0200 51 1130663 1136197 CCT
Lele49g0183 49 1105729 1110925 Lele51g0200 51 1130663 1136197 hybridization