Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0199 ATGTTTGTGTACCAAAGGAAGAAAACTTGGAAAGAGGAAAACCAGAGAGATTCAGCTCACCCCTGCTGCTTGAGCTCGGTGACGCATAAAGCCAGACGGCCCCGCCGATTTTCGCTGGGATCTCTTTATTTTCTGGTTCAAGTTTTTGTGGATGACTTGTTCGTCTATTTGAGAGTTAGATCACGGGTCATTTACCGGCAAGAGTTTTCTGTTGATTTAGATAATTCTTCGACAGCTTCAGGGGAAGCTAGCGTGTCTTCCTCTGGCAATCAGACTGCTCCTCCAAAGTCCACTGCTAAGAAGAAGAGAAATCTTCCAGGAATGCCAGATCCAGACGCGGAGGTGATTGCACTGTCTCCGAAAACCCTTTTAGCGACGAACCGATTCGTGTGTGAAATCTGCAACAAAGGATTTCAGAGGGATCAGAATCTTCAACTCCATCGACGGGGTCATAATCTGCCATGGAAGCTGAGGCAGAGGTCCAGCAAGGAGGTGAGGAAAAGAGTCTACGTCTGTCCTGAGCCAACCTGCGTTCATCATGATCCCTCCAGAGCTTTGGGTGATCTTACCGGAATAAAGAAGCATTTCTGTAGAAAACATGGTGAAAAGAAGTGGAAATGTGACAAGTGTTCAAAGAAATATGCGGTTCAGTCAGATTGGAAGGCTCACTCGAAGATTTGTGGCACCAGAGAGTACAAATGCGATTGTGGGACTCTGTTTTCAAGGAGGGACAGCTTCATCACACACAGGGCATTCTGTGATGCGTTGGCAGAGGAGAGCGCAATAAATCAGCCTCAGCCTCAGCCTCAGATTCAGACTAAGACTCAAACCGTGACGCAAGCTCCTGAGAAGCCTAATTCAGAGTCGGACCCAAAAATTATGAGCGGCGATTCATCCCCTACAGTTCCTGCGCCGGCGCCGGCTCCACCGCCACCACCTACAGCCCCGCCTCCTGCTCCCCAGTCAAATAGCGTCATACCATCTACGTTGCAGACAAAAAATCCAGAGATGCCCGAAAATCCTTCCCAAATCATAGAGGAACCACAGGCCACCACGGCTCTAAATGGTAGCTGTAGCAGCAGTACTAGCTCAACTAGCAATGGCGGCACCAGCAGTACTGTATTCGCAAGCTTGTTCGCTTCCTCCACTGCTTCCGGAAGCCTGCAACCTCCTCCTCGACCTCAAACTCCTGCATTTACTGACCTAATAAGGGCCATGGCTCGACCAGATCGTCCTGCAGAGCTCTCAGGGCCTTCATCATCTGAACCCATTTCTCTCTGCCTCTCCACTAGCAATGGGTCGCCAATCTTTGGAACAGGAGGACAAGAACGTCGCCAGTATGCCCCACCACCACAGCCCGCTATGTCAGCCACCGCGCTACTACAGAAAGCCGCTCAAATGGGTGCAGCAGCAACGAACGCGTCATTGCTACGCGGGTTTGGTATAGTGTCATCTTCCTCATCTTCATCGTCATTAAGCTTGCAAGACAACGTGCCATGGGGTCAGAGGCAAGTAGAACCAGAGAATGCGTCTGTTCACGCGGGGCTTGGTCTCGGACTCCCTTGTGATGGTGGATCTGGGCTGAAGGAATTGATGATGGGGACGCCGTCGGTGTTCGGTCCAAAGCACACGACCCTTGACTTTCTGGGATTGGGGATGGCCGCAGGTGGTGGCACCCCTAGTGGAGGCTTATCAGCACTCATCACTTCCATTGGTAGTGGTCTGGATGTTTCTGCCACAGCCAGACCCTTTGGTAGTGGAGAGATTTCAGGTAAAGATATTGGGAGGAGCTCGTGA 1797 0.5103 MFVYQRKKTWKEENQRDSAHPCCLSSVTHKARRPRRFSLGSLYFLVQVFVDDLFVYLRVRSRVIYRQEFSVDLDNSSTASGEASVSSSGNQTAPPKSTAKKKRNLPGMPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEVRKRVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRRDSFITHRAFCDALAEESAINQPQPQPQIQTKTQTVTQAPEKPNSESDPKIMSGDSSPTVPAPAPAPPPPPTAPPPAPQSNSVIPSTLQTKNPEMPENPSQIIEEPQATTALNGSCSSSTSSTSNGGTSSTVFASLFASSTASGSLQPPPRPQTPAFTDLIRAMARPDRPAELSGPSSSEPISLCLSTSNGSPIFGTGGQERRQYAPPPQPAMSATALLQKAAQMGAAATNASLLRGFGIVSSSSSSSSLSLQDNVPWGQRQVEPENASVHAGLGLGLPCDGGSGLKELMMGTPSVFGPKHTTLDFLGLGMAAGGGTPSGGLSALITSIGSGLDVSATARPFGSGEISGKDIGRSS 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0199 598 Gene3D Classic Zinc Finger 183 263 - -
Lele51g0199 598 MobiDBLite consensus disorder prediction 75 98 - -
Lele51g0199 598 FunFam protein indeterminate-domain 12-like 108 176 - -
Lele51g0199 598 MobiDBLite consensus disorder prediction 302 323 - -
Lele51g0199 598 ProSitePatterns Zinc finger C2H2 type domain signature. 131 151 IPR013087 -
Lele51g0199 598 MobiDBLite consensus disorder prediction 261 342 - -
Lele51g0199 598 FunFam protein indeterminate-domain 5, chloroplastic-like 183 262 - -
Lele51g0199 598 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 84 557 IPR031140 -
Lele51g0199 598 MobiDBLite consensus disorder prediction 261 296 - -
Lele51g0199 598 ProSiteProfiles Zinc finger C2H2 type domain profile. 129 151 IPR013087 -
Lele51g0199 598 SUPERFAMILY beta-beta-alpha zinc fingers 128 225 IPR036236 -
Lele51g0199 598 MobiDBLite consensus disorder prediction 75 111 - -
Lele51g0199 598 Gene3D Classic Zinc Finger 109 175 - -
Lele51g0199 598 MobiDBLite consensus disorder prediction 324 342 - -
Lele51g0199 598 SMART c2h2final6 170 200 IPR013087 -
Lele51g0199 598 SMART c2h2final6 129 151 IPR013087 -
Lele51g0199 598 SMART c2h2final6 205 225 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0199 Lele-ChrLele51 1125629 1128755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0199 71 598 IDZ Gene Family AT5G66730 61.338 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele51g0199 None None None