Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0181 ATGAGATTAATCTTATGGAGTCGGTCTTGGAGAAAAGATGTTGGGGCGGCTCTGGAAGCTTGCGGTCGAGTTGAAGGCAACGTGGCCGGGGGAGTGATGTCTCCATTGGATATGACCGATTGTGTTACTGTTAAGGAAATGTGGCGGTGCGTTGCTCGCGGTCTTCGCGTACCAGCTTCCAAGAGATCGATTCTTAGTGACTCTCTTCGATCTCACATTTCTAGATTTTTATCGACTGGGGGAAACTCCTCATACACTGTGGTGGATCATACTTATGATGCAATCGTTGTAGGCGCCGGGGGTGCAGGGTTGAGAGCCGCTATTGGACTCTCGGAACATGGGTTCAATACTGCTTGCATTACTAAGCTCTTCCCAACTCGTTCACATACTGTTGCAGCTCAGGGTGGTATAAATGCTGCACTGGGAAATATGACCGAGGATGACTGGAGGTGGCACATGTATGACACAGTCAAGGGAAGTGACTGGCTAGGTGATCAAGATGCCATCCAATATATGTGCAGAGAGGCGCCAAAGGCTGTCATTGAGCTTGAGAATTATGGATTACCTTTTTCCCGAACTGAGGATGGAAAGATATACCAGCGTGCATTTGGTGGTCAAAGCCTGAACTTTGGAAAAGGTGGGCAGGCATACCGTTGTGCATGTGCTGCTGATCGAACTGGACATGCTTTATTGCACACTCTTTATGGCCAGGCTATGAAACATAATACTCAATTTTTTGTGGAATATTTTGCGTTGGACCTTATAATGAATAGTGATGGTACTTGCCAAGGAGTAATTGCGTTGAATATGGAGGATGGAACATTACATCGGTTCCAAGCTGCTTCAACAATTTTGGCCACAGGAGGCTATGGTAGGGCATACTTTTCTGCCACCTCAGCACATACATGCACAGGAGATGGTAATGCCATGGTTGCACGTGCAGGGCTCCCGCTCCAGGATTTGGAGTTTGTGCAATTTCATCCAACAGGTATATATGGAGCCGGTTGCCTAATCACAGAAGGTTCTCGTGGAGAAGGTGGAATTCTTAGGAATAGTGAAGGTGAGCGATTCATGGAACGGTATGCACCTACTGCAAAGGATCTTGCATCAAGAGATGTTGTTTCGAGATCAATGACTATGGAGATCCGGGAAGGTCGTGGTGTAGGACCTCTGAAGGATCACATCTATCTACATTTAAATCACTTGCCCCCAGATGTGCTTAAGGAAAGGCTACCTGGTATCTCTGAAACTGCTGCTATATTTGCTGGTGTGGATGTTACAAAGGAACCAATTCCTGTTTTGCCAACTGTGCACTATAATATGGGTGGTATTCCCACTAACCATCACGGAGAGGTGGTTACTATTAAAGGTGACGATCCAGATACAGTAGTACCAGGTCTGATGGCAGCTGGGGAAGCAGCTTGTGCGTCAGTTCATGGTGCCAATAGGCTTGGTGCAAATTCTCTTCTGGACATCGTTGTTTATGGCAGAGCTTGTGCAAATAGGGTTGCAGAAATTCAAAGGCCAGGAGCAAAACAGAAGCCTCTGGAGAAGGATGCCGGTCAAAAGACAATTGCATGGCTGGACAAACTCAGAAATTCAAATGGTGCATTACCGACTTCAAATATTCGATTAAATATGCAACGAGTAATGCAAAATAATGCTGCTGTGTTCCGTACACAGGAGACATTAGAAGAAGGTTGTCAATTAATTGATAAAGCATGGGAGAGCTTTCATGATGTAAAGTTGAAGGACCGTAGTCTGATATGGAACTCCGACTTGATTGAGACTCTTGAGTTGGAAAACCTTTTGATAAATGCCTGCATCACCATGCGCTCGGCTGAAGCCAGGAAAGAGAGTAGAGGAGCACATGCCCGTGAGGACTTTACGAAAAGAGATGATGAGAACTGGATGAAGCACACATTAGGATACTGGGAGAATGAGAAGGTGCGCCTAGAATACAGGCCGGTGCACATGAATACATTGGATGATGAGGTTGAATCATTCCCTCCTAAAGCTCGTGTGTATTAA 2031 0.4589 MRLILWSRSWRKDVGAALEACGRVEGNVAGGVMSPLDMTDCVTVKEMWRCVARGLRVPASKRSILSDSLRSHISRFLSTGGNSSYTVVDHTYDAIVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLNFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFQAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHHGEVVTIKGDDPDTVVPGLMAAGEAACASVHGANRLGANSLLDIVVYGRACANRVAEIQRPGAKQKPLEKDAGQKTIAWLDKLRNSNGALPTSNIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLKDRSLIWNSDLIETLELENLLINACITMRSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENEKVRLEYRPVHMNTLDDEVESFPPKARVY 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0181 676 Gene3D succinate dehydrogenase protein domain 627 676 - -
Lele51g0181 676 PANTHER SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT 81 676 IPR030664 -
Lele51g0181 676 TIGRFAM sdhA_forward: succinate dehydrogenase, flavoprotein subunit 90 676 IPR011281 GO:0006099|GO:0016627|GO:0050660
Lele51g0181 676 FunFam Succinate dehydrogenase complex, subunit A, flavoprotein (Fp) 82 306 - -
Lele51g0181 676 PIRSF SDHA_APRA_LASPO 82 666 - -
Lele51g0181 676 ProSitePatterns Fumarate reductase / succinate dehydrogenase FAD-binding site. 127 136 IPR003952 GO:0016491
Lele51g0181 676 FunFam Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial 628 676 - -
Lele51g0181 676 FunFam Mitochondrial succinate dehydrogenase flavoprotein subunit 331 434 - -
Lele51g0181 676 Pfam Fumarate reductase flavoprotein C-term 545 676 IPR015939 GO:0016491
Lele51g0181 676 FunFam Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial 435 500 - -
Lele51g0181 676 TIGRFAM sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 93 676 IPR014006 GO:0016627|GO:0022900|GO:0050660
Lele51g0181 676 Gene3D Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 331 434 IPR027477 -
Lele51g0181 676 SUPERFAMILY FAD/NAD(P)-binding domain 85 510 IPR036188 -
Lele51g0181 676 Gene3D - 93 500 IPR036188 -
Lele51g0181 676 SUPERFAMILY Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 535 676 IPR037099 GO:0016491
Lele51g0181 676 SUPERFAMILY Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 321 439 IPR027477 -
Lele51g0181 676 Pfam FAD binding domain 93 489 IPR003953 -
Lele51g0181 676 Gene3D - 516 626 - -
Lele51g0181 676 FunFam Succinate dehydrogenase flavoprotein subunit (SdhA) 515 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0181 Lele-ChrLele51 1029762 1038023 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0166 49 999457 1012715 Lele51g0181 51 1029762 1038023 hybridization
Lele50g0185 50 1077365 1086694 Lele51g0181 51 1029762 1038023 hybridization