Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0166 ATGCCAATACCGATTCGGAGACTCTTGGCTGGGTATCTGCCACTTTCGTATGCAAATCGAGCTGAGCTCATTTCATTCAACTTGGCCAACGCGAGGCTGTACCACAAGGCAATGAAAAGATGGACGCGTGAAGCAGAAAGAAAAATGAAAGATGCCTCAAAATCATATCAATTACAAAGAGAAATTAATGAGCAAAAGAAGTGGTGGGTTGCAGCAGATTGGATGGAACTGACGAGAGGTTTAGATAAGGAAATAGAGATGCCATTACCAATCCCTTCAGGTTATAATCCCTCCAATAGGGACTCTTCTTCTTCTTCTCCAACTCTAGCTTCAACAGCAGGCGAAATCAGTAGTGATCAACCTCAAACTTCTGATCACTATCATCTTCATCATCCTGTTCCTTCTCTGCCATCGAACCCACTTCAGCAATCGCAGAGAAACGCAAGAGATCCAGATCCGCCAAGCTTAACAGCGATCACACCGGTTGCTGGCAGGTCAAACCCAAGACCAGCAACAGCGACGACAATTAGGTACAGAGAATGCTTGAAGAATCATGCGGCGAGCATGGGAGGATACGTCGTGGATGGATGCGGGGAGTTCATGCCAAGCGGAGAAGAAGGAACTCCACAATCATTGAGATGTGCTGCTTGTGACTGCCACCGGAATTTTCACCGGAAAGAGACCGAAGGGGAACCTCAAACTAATGTTCTCAATTACTACACCTACCCTCCCAGCAAAAGCAATAACGCACAAAGTAGGATTATTTTTCCTCAGTTTCCGCCACACCCTCCTTCTCTACATCGTCATCATCAACAGCATATGAGATTTTCAGGAGGGTCGTTCCCGCCGTTGATGATGGCCTTCGGCGGCGGCGGGGTGGCGGAGTCTTCTAGCGAAGATCTGAACATGTTTCAGTGTAATGATGCGGGAGGGCAAGGGTCAGTGCAGGCGGCAGCGTCATCGAGGAAGCGGCTTAGGACCAGGTTTAGCCAGGAGCAGAAGGATAGGATGATGGAGTTCGCCGAGAAGTTGGGATGGAGGATCCAGAAACATGACGAGCAAGAAGTACAGCAGTTTTGTAATCAAGTGGGTGTGAAACGGCAGGTTTTCAAGGTTTGGATGCACAATAACAAGCAGGCCATGAAGAAGAAGCAAATGTAA 1161 0.4798 MPIPIRRLLAGYLPLSYANRAELISFNLANARLYHKAMKRWTREAERKMKDASKSYQLQREINEQKKWWVAADWMELTRGLDKEIEMPLPIPSGYNPSNRDSSSSSPTLASTAGEISSDQPQTSDHYHLHHPVPSLPSNPLQQSQRNARDPDPPSLTAITPVAGRSNPRPATATTIRYRECLKNHAASMGGYVVDGCGEFMPSGEEGTPQSLRCAACDCHRNFHRKETEGEPQTNVLNYYTYPPSKSNNAQSRIIFPQFPPHPPSLHRHHQQHMRFSGGSFPPLMMAFGGGGVAESSSEDLNMFQCNDAGGQGSVQAAASSRKRLRTRFSQEQKDRMMEFAEKLGWRIQKHDEQEVQQFCNQVGVKRQVFKVWMHNNKQAMKKKQM 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0166 386 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 178 227 IPR006456 -
Lele51g0166 386 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 177 227 IPR006456 -
Lele51g0166 386 ProSiteProfiles 'Homeobox' domain profile. 320 384 IPR001356 GO:0003677
Lele51g0166 386 FunFam Zinc-finger homeodomain protein 2 310 383 - -
Lele51g0166 386 Pfam ZF-HD protein dimerisation region 176 228 IPR006456 -
Lele51g0166 386 Gene3D - 308 383 - -
Lele51g0166 386 MobiDBLite consensus disorder prediction 87 171 - -
Lele51g0166 386 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 153 379 - -
Lele51g0166 386 MobiDBLite consensus disorder prediction 95 123 - -
Lele51g0166 386 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 322 379 IPR006455 -
Lele51g0166 386 SUPERFAMILY Homeodomain-like 312 383 IPR009057 -
Lele51g0166 386 MobiDBLite consensus disorder prediction 136 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0166 Lele-ChrLele51 951293 954406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0166 115 386 ZF-HD Transcription Factor Family AT2G18350 45.907 1.69e-67 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele51g0166 ZF-HD_dimer 2.8e-31 No_clan