Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0143 ATGTTTTCCGCCAGAGACATGCCTTCTCCATCCTCAATTTTCTCGGCTTATGCCTCCATGACCGCCTCCGTCATGCTGTTTCGTTCCATGGCCAACGACCTCATACCTCATCCTCTTCGAGGTTATCTTCTTAATGCTTTTCGCTATTTCTACAAGCCTTACTCCCCTGTTCTCACTCTCCTCATCGAAGAATCCAGCGGAATTTCTCGCAACCAAGTCTACGATGCTGCAGAAGTTTACTTATCCGCCAGAGTCAGTCCCCAAAACGACAGGCTCAAGATCAGCAAGAGTCCCAAAGAGAAGAACTTGATGGTTCGCCTGGTAAAGGGTGAGAAGCTGGAGGATTGGTATAATGGGGTTGAGCTCAAGTGGAGATTCAATTCTTCAGAGCCAGAGAACAGCCACCACAATGATCCACACTTGTCAGGTAGATCGGAAAGGCGATACTTCGAGTTGAGTTTCCACAAGAAGCATAAGGAGATGGTGTTAAATTCTTATCTTCCGTTGGTCCTCGAAAAAGCCAAGGTCATGAGAGACGAGGAAAGGATACTGAAGATGCATACTTTAAGCACCTCCTACGGTTATTCGGTGGTCAAGTGGGATTCTGTGAATCTCGAACACCCATCGACCTTTGATACTCTTGCTATGAACCCTGAACTGAAGAATGCTCTGATGGAGGACCTAAATAGGTTCGTTAAGAGGAAGGACTTTTACAAGAAAGTTGGGAGGGCGTGGAAACGAGGGTACTTGCTGTATGGGCCTCCGGGTACTGGGAAATCGAGCTTGATTGCAGCCATGGCTAATTACTTGAAGTTTGATATCTTCGACCTTCAACTTGAAAATATCAAGAGAGATTCGGACCTCAGAAAGCTGCTTCTGGCCACTGCTAATAGGTCCATTCTCGTGATCGAAGACATTGATTGCAGCGTGGATCTGCCAGGGCGCCGCCAAGGAGGAGGAAATAATAATAAGACTGCTAAGAATAAGAACGCTGACGCACGGCAGCTGACGTTGTCTGGGTTACTGAACTTCATAGATGGGCTCTGGTCAAGTTGTGGAGACGAGAGGATTATAGTGTTCACAACCAACCACAAGGAAAGGCTAGACCCGGCCCTGTTACGCCCAGGAAGAATGGACATGCACATTCACATGTCCTACTGCTCATACCATGGCTTCAAGCTTTTGGCCTCAAATTATTTGGGAATTTCCAGTGACCAGCACCAGAAACTGTTTACAGAAATAGAAGGGCTCATAGAGGACACTCACATAACCCCTGCTCAAGTGGCAGAGGAGCTCATGAAGAGTGAAGACGCTAAAGATGCGCTTGAAGGCTTCTTGACTCTGCTTAAGCGGAAGAAGATGGAAGGTGACGTGTCTGAGAATGATGAACCAGAGAAACCATTGTTTCGAGAAACAAAAAGGAGAAGAGTTAATTGCAAACAGGGGAAAACTGTGGGGGTCGGCAAGAGGAATAGTGGGTGTAGTACCCCAAGAAGGACAAGAAGAGGAACTATCTTGTAA 1521 0.4688 MFSARDMPSPSSIFSAYASMTASVMLFRSMANDLIPHPLRGYLLNAFRYFYKPYSPVLTLLIEESSGISRNQVYDAAEVYLSARVSPQNDRLKISKSPKEKNLMVRLVKGEKLEDWYNGVELKWRFNSSEPENSHHNDPHLSGRSERRYFELSFHKKHKEMVLNSYLPLVLEKAKVMRDEERILKMHTLSTSYGYSVVKWDSVNLEHPSTFDTLAMNPELKNALMEDLNRFVKRKDFYKKVGRAWKRGYLLYGPPGTGKSSLIAAMANYLKFDIFDLQLENIKRDSDLRKLLLATANRSILVIEDIDCSVDLPGRRQGGGNNNKTAKNKNADARQLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMHIHMSYCSYHGFKLLASNYLGISSDQHQKLFTEIEGLIEDTHITPAQVAEELMKSEDAKDALEGFLTLLKRKKMEGDVSENDEPEKPLFRETKRRRVNCKQGKTVGVGKRNSGCSTPRRTRRGTIL 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0143 506 MobiDBLite consensus disorder prediction 484 506 - -
Lele51g0143 506 Gene3D - 383 456 - -
Lele51g0143 506 PANTHER BCS1 AAA-TYPE ATPASE 15 454 - -
Lele51g0143 506 Pfam Domain associated at C-terminal with AAA 35 126 IPR025753 -
Lele51g0143 506 SMART AAA_5 245 388 IPR003593 -
Lele51g0143 506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 436 IPR027417 -
Lele51g0143 506 CDD AAA 246 386 - -
Lele51g0143 506 Pfam ATPase family associated with various cellular activities (AAA) 250 385 IPR003959 GO:0005524|GO:0016887
Lele51g0143 506 MobiDBLite consensus disorder prediction 488 506 - -
Lele51g0143 506 ProSitePatterns AAA-protein family signature. 356 374 IPR003960 GO:0005524|GO:0016887
Lele51g0143 506 Gene3D - 198 382 IPR027417 -
Lele51g0143 506 FunFam AAA-ATPase ASD, mitochondrial 201 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0143 Lele-ChrLele51 838476 840571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0143 219 384 Calmodulin-binding Proteins AT3G56690 28.161 3.53e-12 67.4