Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0135 ATGGCGGGTTTATTCTCACTAGGCGGTGGAGGAGGGAGGGGAGGAGGTGGGAGCAACCAGGACGACGAAGCCCACCACCACAATAACCCACCCACGGGAGTTCCTCATCCAGACGCCTTATATTGGTACAAGAGTAATGAAGACGTATCTTGTTACAGAGGCTTCGAGCTGTGGAACCAGCAGCAGCACCAGGTCATGCCTCCTCAAGCGAGGCCGCTTCTCCCCCAAGATCTTTACTCGCTAGGGGTGGGGCCGAGCAGCAGGAGCTCCGATGATCACTCCTCGTCGAGATCGGGCGTCATGATGATGCGTTCCGGCGGCGGAAGCAGCGGCGGCGGAGGAATAAGCTGCCAAGACTGTGGGAACCAAGCAAAGAAGGACTGCCCGCACATGCGGTGCAGGACTTGCTGTAAGAGCCGTGGCTACGACTGCCATACGCATGTGAAGAGCACTTGGGTTCCGGCCGCCAAGCGACGCGAGAGACAGCAGCAACAACAGCAGCAGCAACTTCAGCTTGGAGCAGGAGACAACAATCCCAAGAGGCTGAGAGATACTTGTAATAATAACCCCAGCCCCTCTACTCATGTGCAAATGCCAACCCACTCTTCATCAGCAGAAGGGTTAGAGCATGGGAATCTTCCAGCAGTGGTAAGTTCCTCGGCGGAGTTCCGGTGCGTACGGGTTAGCTCCATGGACGAGGCTGACGAGCAATTCGCGTACCAGACGGCTGTGAACATCGGAGGCCATGTATTCAGAGGAATTCTCTATGACCAAGGCCCTGATCCCATTTACATGTCCACCGCTGATACTTCTCCCGGTGGAGCCGTTCAGCCCCTCAACCTCATTGCTGCCACCGGAGCTTCTGCTCTTCCGGCTGCCGCCGCAAGCAGTGGTGGTGCCGCCGCCGGGGCTTCCTCCACTGGGCCGCTACTCGATCCTTCCTTGTATGCAGCGCCACTTAACCCTTTCATTTCTGGCAGTGGTACGCAGTTCTTTCCTCACCCAAGATCTTGA 1014 0.571 MAGLFSLGGGGGRGGGGSNQDDEAHHHNNPPTGVPHPDALYWYKSNEDVSCYRGFELWNQQQHQVMPPQARPLLPQDLYSLGVGPSSRSSDDHSSSRSGVMMMRSGGGSSGGGGISCQDCGNQAKKDCPHMRCRTCCKSRGYDCHTHVKSTWVPAAKRRERQQQQQQQQLQLGAGDNNPKRLRDTCNNNPSPSTHVQMPTHSSSAEGLEHGNLPAVVSSSAEFRCVRVSSMDEADEQFAYQTAVNIGGHVFRGILYDQGPDPIYMSTADTSPGGAVQPLNLIAATGASALPAAAASSGGAAAGASSTGPLLDPSLYAAPLNPFISGSGTQFFPHPRS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0135 337 MobiDBLite consensus disorder prediction 82 103 - -
Lele51g0135 337 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 321 IPR007818 GO:0003700|GO:0006355
Lele51g0135 337 MobiDBLite consensus disorder prediction 1 37 - -
Lele51g0135 337 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 213 260 IPR006511 -
Lele51g0135 337 Pfam Domain of unknown function (DUF702) 114 261 - -
Lele51g0135 337 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 116 158 IPR006510 -
Lele51g0135 337 MobiDBLite consensus disorder prediction 157 207 - -
Lele51g0135 337 MobiDBLite consensus disorder prediction 76 114 - -
Lele51g0135 337 MobiDBLite consensus disorder prediction 156 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0135 Lele-ChrLele51 797530 799105 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0135 1 337 C2H2 Transcription Factor Family AT3G51060 46.702 6.94e-80 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lele51g0135 DUF702 3.8e-63 No_clan