Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0112 ATGCCTCCTCTTCTCTTTCTACTGGTGCTCTGCGCACCGTTCCTAACGTGCGCGGAGCGAAGCAGCGTCGCCATTGCTGAGATCGGAGCCCTAACGTCCTTAAGGCTCAACCTTCAGGATCCTCTCGGCGCTCTTGACGGTTGGGATGCTTCCACACCGTCTGCTCCTTGCGACTGGCGCGGAGTTGCTTGTTACAACAACAGGGTCACCGAGTTGCGCTTGCCTCGGCTTAAACTCAGTGGCCGGCTTACTGACCGTCTTTCCGACTTGCGCATGTTGCGGAAGCTGAGCCTTCGCTCTAACTCCTTCAACGGGACCATCCCTTCGTCGCTCGGTAAATGTACCTTCCTGCGCGCCGTGTTTCTGCAGTCCAACTCACTCTCCGGTATTCTCCCGCCGGAGATCCGAAACATCGCTGGCCTTCAGATTCTTAATGTCGCGCAAAACCGTCTCTCCGGCAGATTTCCCGGCGACCTCCCGTTGAACCTGAAGTACGTCGACCTCTCGTCGAACTCCTTTTCTGGCAAGATTCCGAGTGCCATTGCCAACCTTTCTCAGCTTCAGCTCATCAACCTGTCGTACAACCAGTTCTCGGGCGAGATTCCGGCGATCTTTGGACAGCTTCAGCAGCTCGAATACCTCTGGCTTGATCACAATCTTCTCGGAGGAACTCTACCTTCGGCACTTGCTAACTGTTCTTCTCTCGTGCATCTGAGCATAGAAGGAAATGCACTTGGAGGAGTGATCCCGGCGGCCATTGCGGCTCTTCCGAGGCTTCAGGTGATCTCTCTCTCTCAGAATAATCTTACCGGATCGATCCCGGCTTCCATTTTCTGCAACATTTCGGTCTACACTCCGTCGCTTCGAATCGTTCAGTTAGGATTTAATGGTTTCACCGATATTGTCGAGCCTCAGGCGTCATCGTGTTTCAGTGTTCTTCAGGTTTTGGATATTCAGCACAATAGCATACACGGCACGTTTCCCTTGTGGATAACAAATATGTCCACGTTAACAATGCTTGATGTTTCCAGTAATGCATTTTCTGCCGAGATTCCATCACAAATCGGAAACCTCGCGAAATTGGAGGAGTTAAGGATGGCAAACAATTCATTTACTGGGATGATTCCAGAGGAAATCAAGAAATGTGCTTTCCTGCGTGTTATTGATTTTGAAGGCAACCGGTTTACCGGAGACGTTCCTTCGTTCTTTGGTTATATGTCAGGTCTGAAGGTGCTGTCCCTTGGTGGGAATCTTTTCTCTGGTAAAGTTCCGGAGAGTTTTGGTAAACTTTCGGCGCTGGAAACCCTTAGTTTGAGAGGTAATAACTTGAATGGAACCATGCCTGCGGAAGTCATGGGATTGAGCAATATTTCAAGTCTTGATCTTAGCGGAAACAAGTTTATGGGTCAGATATCTTCAAGTATTCGGAACCTGAGTCGATTAATGGTTCTCAATCTGAGTGGCAACGGCTTTTCTGGAAAAATTCCTGCTAGTTTGGGGAATCTTTTCAGGCTAACTACACTAGACTTGAGCAAACAGAATCTCTCTGGAGAGTTACCATTTGAGCTTTCAGGTTTGCCGAATCTGCAAGTTATTGCCTTGCAGGAGAACAGATTATCTGGGGACGTTCCTGAAGGGTTTAGCAGTTTGACGAGTCTGCGATATGTGAACCTGAGCTCTAATGCGTTTTCGGGACATATTCCTCAAAATTATGGCTTTCTTCGATCACTGATTGCTCTTTCTTTGTCTGACAATCACATTACAGGAGTAATTCCTTCGGAGATCGGAAACTGCTCTGATATTGAGATTCTTGAGCTTGGTTCAAATTCTTTGACAGGTCATATTCCAACTGATCTCACTCGTCTCGCCCATTTGAGAGAGCTTGATTTGAGTAGAAACAAATTAACGGGAGATATACCCGGTGATATCTCCAAATGTTCGTCCTTAAATGCTCTGCTGGTGGACCACAACCGTCTTTCAGGCAATATACCGGAGTCGCTGTCTGAGCTATCAAACCTGACAATGCTGGATCTCTCAGCTAACAACTTGAGCGGGGAAATATCGAGTAATATTTCCACGATGCCTAATTTATTGTCCTTCAATGTCTCTGGAAATAATCTGAAAGGTGAGATACCGCCAACCTTGGGTGCTCGATTCAACAATACCTCTGCATTTGCGGATAATCAGAACTTATGTGGGAAGCCACTGGATAGGAAGTGTGAAAATGTAGTTGATAGGGACAGGAAGAGGTTGATAGTGTTGATTGTTGTAGTTGTTGCTGGAGCTTGCTTACTATCATTGTGTTGCTGCTTCTACATATACAGCCTTTTGCGGTGGCGGAAAAGGCTCAAGGAACGGGCGTCTGGGGAGAAAAAAAGAAGTCCTGCTAGGGCGAGTTCTGGTGCAAGTGGAGGTCGAGGCAGCATTGATAATGGTGGACCAAAACTGGTCATGTTTAATACCAAAATCACACTTGCAGAAACCTTTGAAGCAACTAGGCAGTTTGATGAAGAAAATGTGCTGAGCAGAACAAGGTACGGATTGGTATTCAAGGCTTGCTACAATGACGGAATGGTGCTTTCAGTTCGCAGACTCCAAGATGGATCGCTGGACGAAAACATGTTCAGGAAAGAAGCAGAATCACTAGGAAAAGTGAAGCACCGAAATTTAACCGTTCTGAGAGGTTACTATGCCGGGCCACCGGACATGAGGCTTCTGGTCTATGATTACATGCCCAATGGAAACCTTGCAACCCTCCTCCAAGAAGCTTCTCATCAGGATGGCCATGTTCTGAATTGGCCAATGCGCCACCTCATTGCACTTGGCATTGCTCGTGGCTTAGCTTTCCTCCACCAGTCCTCAATGGTTCATGGCGACGTTAAACCACAAAGTGTCCTGTTCGATGCTGATTTCGAAGCTCATTTGTCAGATTTTGGACTCGACCGCCTTACAGTAACCACCCCTGGCGGACCCTCCACTTCAACCTCAGTGGGCACATTGGGTTACGTATCCCCGGAAGCTGTATTAACAGGGGAAGCCACGAAAGAGTCTGATGTGTACAGCTTTGGCATAGTGTTGCTCGAGCTTCTTACCGGAAAGCGACCGGTGATGTTCACGCAGGATGAAGATATAGTGAAATGGGTAAAGAAACAACTGCAAAAGGGCCAAATCACGGAGTTGTTGGAACCAGGATTGCTTGAGCTCGATCCAGAATCATCCGAGTGGGAAGAGTTCTTGCTCGGTGTGAAAGTAGGGTTGCTCTGCACAGCACCTGACCCTCTTGATCGACCAACCATGTCTGACATTGTGTTCATGCTAGAAGGCTGCCGCGTTGGACCCGACATCCCATCCTCCGCCGATCCCACCTCTCAACCTTCTCCGGCGTGA 3387 0.481 MPPLLFLLVLCAPFLTCAERSSVAIAEIGALTSLRLNLQDPLGALDGWDASTPSAPCDWRGVACYNNRVTELRLPRLKLSGRLTDRLSDLRMLRKLSLRSNSFNGTIPSSLGKCTFLRAVFLQSNSLSGILPPEIRNIAGLQILNVAQNRLSGRFPGDLPLNLKYVDLSSNSFSGKIPSAIANLSQLQLINLSYNQFSGEIPAIFGQLQQLEYLWLDHNLLGGTLPSALANCSSLVHLSIEGNALGGVIPAAIAALPRLQVISLSQNNLTGSIPASIFCNISVYTPSLRIVQLGFNGFTDIVEPQASSCFSVLQVLDIQHNSIHGTFPLWITNMSTLTMLDVSSNAFSAEIPSQIGNLAKLEELRMANNSFTGMIPEEIKKCAFLRVIDFEGNRFTGDVPSFFGYMSGLKVLSLGGNLFSGKVPESFGKLSALETLSLRGNNLNGTMPAEVMGLSNISSLDLSGNKFMGQISSSIRNLSRLMVLNLSGNGFSGKIPASLGNLFRLTTLDLSKQNLSGELPFELSGLPNLQVIALQENRLSGDVPEGFSSLTSLRYVNLSSNAFSGHIPQNYGFLRSLIALSLSDNHITGVIPSEIGNCSDIEILELGSNSLTGHIPTDLTRLAHLRELDLSRNKLTGDIPGDISKCSSLNALLVDHNRLSGNIPESLSELSNLTMLDLSANNLSGEISSNISTMPNLLSFNVSGNNLKGEIPPTLGARFNNTSAFADNQNLCGKPLDRKCENVVDRDRKRLIVLIVVVVAGACLLSLCCCFYIYSLLRWRKRLKERASGEKKRSPARASSGASGGRGSIDNGGPKLVMFNTKITLAETFEATRQFDEENVLSRTRYGLVFKACYNDGMVLSVRRLQDGSLDENMFRKEAESLGKVKHRNLTVLRGYYAGPPDMRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHQSSMVHGDVKPQSVLFDADFEAHLSDFGLDRLTVTTPGGPSTSTSVGTLGYVSPEAVLTGEATKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMSDIVFMLEGCRVGPDIPSSADPTSQPSPA 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0112 1128 SUPERFAMILY RNI-like 245 540 - -
Lele51g0112 1128 FunFam Uncharacterized protein 256 472 - -
Lele51g0112 1128 ProSiteProfiles Protein kinase domain profile. 835 1115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g0112 1128 SUPERFAMILY L domain-like 472 735 - -
Lele51g0112 1128 MobiDBLite consensus disorder prediction 788 813 - -
Lele51g0112 1128 SMART LRR_sd22_2 208 234 - -
Lele51g0112 1128 SMART LRR_sd22_2 256 283 - -
Lele51g0112 1128 SMART LRR_sd22_2 160 186 - -
Lele51g0112 1128 SMART LRR_sd22_2 670 693 - -
Lele51g0112 1128 SMART LRR_sd22_2 454 480 - -
Lele51g0112 1128 SMART LRR_sd22_2 622 651 - -
Lele51g0112 1128 SMART LRR_sd22_2 334 360 - -
Lele51g0112 1128 Pfam Leucine Rich Repeat 481 502 IPR001611 GO:0005515
Lele51g0112 1128 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 520 615 - -
Lele51g0112 1128 ProSiteProfiles Leucine-rich repeat profile. 624 646 IPR001611 GO:0005515
Lele51g0112 1128 Gene3D Phosphorylase Kinase; domain 1 814 910 - -
Lele51g0112 1128 Pfam Leucine rich repeat 524 562 IPR001611 GO:0005515
Lele51g0112 1128 Pfam Leucine rich repeat 385 443 IPR001611 GO:0005515
Lele51g0112 1128 Pfam Leucine rich repeat 162 221 IPR001611 GO:0005515
Lele51g0112 1128 Pfam Leucine rich repeat 313 370 IPR001611 GO:0005515
Lele51g0112 1128 Pfam Leucine rich repeat 576 635 IPR001611 GO:0005515
Lele51g0112 1128 FunFam Putative LRR receptor-like serine/threonine-protein kinase 798 910 - -
Lele51g0112 1128 PANTHER OS05G0588300 PROTEIN 411 522 - -
Lele51g0112 1128 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 182 - -
Lele51g0112 1128 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 616 740 - -
Lele51g0112 1128 Gene3D Ribonuclease Inhibitor 453 743 IPR032675 -
Lele51g0112 1128 Gene3D Ribonuclease Inhibitor 26 159 IPR032675 -
Lele51g0112 1128 Pfam Protein kinase domain 845 1102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g0112 1128 Gene3D Transferase(Phosphotransferase) domain 1 911 1114 - -
Lele51g0112 1128 SUPERFAMILY Protein kinase-like (PK-like) 817 1116 IPR011009 -
Lele51g0112 1128 SUPERFAMILY L domain-like 38 330 - -
Lele51g0112 1128 SMART LRR_typ_2 256 280 IPR003591 -
Lele51g0112 1128 SMART LRR_typ_2 478 502 IPR003591 -
Lele51g0112 1128 SMART LRR_typ_2 550 572 IPR003591 -
Lele51g0112 1128 SMART LRR_typ_2 526 549 IPR003591 -
Lele51g0112 1128 SMART LRR_typ_2 184 207 IPR003591 -
Lele51g0112 1128 SMART LRR_typ_2 334 358 IPR003591 -
Lele51g0112 1128 SMART LRR_typ_2 430 454 IPR003591 -
Lele51g0112 1128 SMART LRR_typ_2 670 694 IPR003591 -
Lele51g0112 1128 SMART LRR_typ_2 574 598 IPR003591 -
Lele51g0112 1128 SMART LRR_typ_2 90 114 IPR003591 -
Lele51g0112 1128 SMART LRR_typ_2 208 232 IPR003591 -
Lele51g0112 1128 SMART LRR_typ_2 622 646 IPR003591 -
Lele51g0112 1128 SMART LRR_typ_2 406 429 IPR003591 -
Lele51g0112 1128 PRINTS Leucine-rich repeat signature 625 638 - -
Lele51g0112 1128 PRINTS Leucine-rich repeat signature 670 683 - -
Lele51g0112 1128 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 911 1114 - -
Lele51g0112 1128 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Lele51g0112 1128 Gene3D Ribonuclease Inhibitor 160 448 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0112 Lele-ChrLele51 645984 649370 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0112 4 1128 Receptor kinase-like Gene Family AT4G36180 69.305 0.0 1515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Lele51g0112 Pkinase 2.8e-33 CL0016