Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0110 ATGGAACCGATGGAGTCTTGTGTCCCACCGGGCTTTCGGTTCCACCCGACAGATGAAGAGCTCGTTGGTTATTATCTCAGGAAGAAAGTTGCTTCTCAGAAGATAGATCTTGACGTTATCAGAGAGATCGATCTCTATCGCATTGAACCATGGGATCTGCAAGAAAGATGCAGGATCGGGTATGAGGAACAGAACGAGTGGTATTTCTTCAGCCACAAAGATAAGAAGTATCCGACGGGGACGAGGACGAACAGAGCAACCATGGCTGGGTTCTGGAAGGCGACAGGAAGAGACAAGGCAGTGTACGACAAGACCAAGCTCATAGGAATGAGGAAGACCCTTGTTTTCTACAAAGGAAGAGCCCCTAATGGACAGAAAACTGATTGGATCATGCACGAGTATAGGCTTGAATCTGATGAAAATGCACCCCCTCAGGAAGAAGGCTGGGTTAACGAAGAAGATGACCAAAACAGGCTGGTCTACAACAACAACAACAGCAAAAGGGTAACTGATTGGAGGGCTCTTGACAAATTTGTGGCTTCTCAATTGAGTCAAGATCAAGAGAGGCATGAGAGTAGTGATAATCATGGAATGTCAGGCTTTGAAAGCCACGAGGCACTGCAGCTATTGCAGAGTAGTAGCGATGAAGGCAACAAGTTCATGAGCCCATTTTTAAATGGAAGCTCAGACTGTGACATTGGGATATGCGTGTTTGAGAAATGA 723 0.462 MEPMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDENAPPQEEGWVNEEDDQNRLVYNNNNSKRVTDWRALDKFVASQLSQDQERHESSDNHGMSGFESHEALQLLQSSSDEGNKFMSPFLNGSSDCDIGICVFEK 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0110 240 Gene3D NAC domain 17 196 IPR036093 GO:0003677|GO:0006355
Lele51g0110 240 ProSiteProfiles NAC domain profile. 8 162 IPR003441 GO:0003677|GO:0006355
Lele51g0110 240 SUPERFAMILY NAC domain 5 145 IPR036093 GO:0003677|GO:0006355
Lele51g0110 240 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Lele51g0110 240 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 152 - -
Lele51g0110 240 FunFam NAC domain-containing protein 17 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0110 Lele-ChrLele51 631929 633962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0110 171 239 NAC Transcription Factor Family AT2G18060 39.024 3.19e-09 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele51g0110 NAM 1.1e-38 No_clan