Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0104 ATGAAGCGGGCAAGGAAATCGAACAGGGTTTCGTGGGCTCCTGGATTTAATCTGTGTCAGGTGAAGTTGTTCTTATCTGAAGACTGCCCTTCGAAAGTTAGCCAGACATCTCAAGATCTGCTTCAAGCAAAGAAATCATCAACTTTGGATTCAAGCACTACCGAATCTTATGATTTACCTCCTGGCTTTGAAGGCAATCATTTTTTGAACCATCTAAGGAACGAACTCTCCCACTTGTATCAGATTAAATGGAAAGCTCCTCCCCGGTTTGCTCTCAGTCAAAATTGGCTAGTTGCAGCTGGTGAAGAAAGTAGGGAGAAAATGGATCAAAAGCTAAGAGAAATGAAGGTGCTTGAAGCAGTATATCCACGCCCGTCAGCTATTCCTCCAAGTCCATCTGTTGCTTTAGTTGTAGGGGAGGAAGACTATGACGATAACCTCACTCCTCTTATCCCTATCGTTCCCATCGAGGAAGAAGAGCTTATGGATATTAACCCTGAATTGTCAGCAACAATTGACACCTCCGTCACTCTGCAGACACTAAGTCTGCACCAACCCATATCAGCAACAGATAGACCCATATGTTCACAGCCTAGTACCTCATCCACTCTAGTCTCACCTGGTACATCTGGTTTGGAAGCAGATCTTGCTGCGGCTTCTGCTGTTGCTGCTGCCATCATGAATAGTAATGAGCAAGGCAGCTCAATTGACATGGATCTACTTGTTAGAATACTTAATGATCCATTATTGATTGAGAAGTTGAGAAGTGCTCATGATGGAGCTGCAGCGACCACTGTAAGTGCATCCGCAAATATATTGGGTTTACCTAGTTCTGGATTCAAGTGCGCTTCTCCATCAGTTTCATCATCTACACTTGGACCTGATAAGCCAACTTCTGGGGTTAATACCTCAAGTATTGTGGGTTTGTTTCCTGATTCTGGCTTGATGTCAGCTACTTCTTCGGTTCAACTGATGCATACACTAGTTAAGCCAGCAACGCCGTCACTTCTATTTTCTAGGCCTATGCCAGGGAACCTAGCAACTCCGTCAGCTCCATTGCTTTCACATACAACTAATGCTGATATTCACATGCCTGTGAACGAAACCACTGATCATTTGTCAAGTGGTGGTCTGCCATCTGTAACTACCACCCAACGACCTCAACAAGATACTGTTAAGCAAGCAGCACCTATGTCATCCATTTCATCCAGGGAACCGAGCATGGTGCCATTACCTTCAACAGGCGAGAGCATGCTTGCAGTAGTAAACCAGGTGCGACCCCCTACAACTACAATGGCTTACCGACCTAGTACAGGCTCAGCATTTGCTGGGAAGGAAACTCATCCTGTGAAGGATCTCAGTTATTATAAGAACCTTATTAGGCAACATGGTGCAGATGGTAATAATACTAGGCAAGAGACGCATGACTCCCAAATAGCTATCCGTCAAACTAATTTCAAAGATTTGAAACTGGTTCATAACAATAAACCAGGAGAAGTGAATTTCAAAATCCAGAAACCTTGCATATACTTCAAAAGTTCAAGGGGTTGTCGAAATGGTTCCAATTGCCCTTATCAGCATGACATGTCAGCCCAATGGGGGTCTGGTAACATCCTAGGGTCCCAGATTGCAAAAAGAGCTAAATTAGGACCAGAAGTCAGGGGTAGAACATTAATTTAG 1680 0.4411 MKRARKSNRVSWAPGFNLCQVKLFLSEDCPSKVSQTSQDLLQAKKSSTLDSSTTESYDLPPGFEGNHFLNHLRNELSHLYQIKWKAPPRFALSQNWLVAAGEESREKMDQKLREMKVLEAVYPRPSAIPPSPSVALVVGEEDYDDNLTPLIPIVPIEEEELMDINPELSATIDTSVTLQTLSLHQPISATDRPICSQPSTSSTLVSPGTSGLEADLAAASAVAAAIMNSNEQGSSIDMDLLVRILNDPLLIEKLRSAHDGAAATTVSASANILGLPSSGFKCASPSVSSSTLGPDKPTSGVNTSSIVGLFPDSGLMSATSSVQLMHTLVKPATPSLLFSRPMPGNLATPSAPLLSHTTNADIHMPVNETTDHLSSGGLPSVTTTQRPQQDTVKQAAPMSSISSREPSMVPLPSTGESMLAVVNQVRPPTTTMAYRPSTGSAFAGKETHPVKDLSYYKNLIRQHGADGNNTRQETHDSQIAIRQTNFKDLKLVHNNKPGEVNFKIQKPCIYFKSSRGCRNGSNCPYQHDMSAQWGSGNILGSQIAKRAKLGPEVRGRTLI 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0104 559 MobiDBLite consensus disorder prediction 369 408 - -
Lele51g0104 559 ProSiteProfiles Zinc finger C3H1-type profile. 502 530 IPR000571 GO:0046872
Lele51g0104 559 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 2 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0104 Lele-ChrLele51 596002 600847 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lele51g0104 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0093 49 568760 573041 Lele51g0104 51 596002 600847 hybridization
Lele50g0110 50 659764 663537 Lele51g0104 51 596002 600847 hybridization