Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0091 ATGGCGACTTCTTCAGCAACAAACAGCTTTTGCTTCCTCCAAGCTCATATACTCTCCCCCTCCCCCCTTCTTCTTCCTCCTCTTCTATCTTTAAAACCTCACAAACTCACCTCTTCTTTCATAACCCCTCCACAATCCTCTGCACAAACGGGATTTTCACGCCAAGATAGTAGGATGCAATACAATGGTGTGAAAATGAAGTACTTGCACAATCTGATACAGGTTCTAGAGAGCAGAGTATATGTGATATGCTTTGGTGGGATAAAACCAGAGGTAGATTCTCTGTTCTCCGTTACGGGAGCCTCCGGTGAAGACATTTGTTTGCAAAATGTGAGCTGTGATGTTGCGAATAGAATCTCTAAGAACCATCTTGATGGGCACATTGAAGTGGCCAAACAAGTGAGATCCTTTGGGGGGTTAATGAAAGAAGAGGGGAGATGGGATGTTCAGTGCAAAGAAGACTTGAAGATGGAGAAACAAGGACTCTCTTTCCTCGGCCACGCTCACGCTCGGTCTTCCTTTTGTCGATGCTTTTGCTTGGAAATGGATCGGTGGAAACCTGAAGATTTGTCTAAATCTGCATCTGTTGCGGCGGATTTTGCGCCTTCTTCTCATCAGCCTCAGTCGCAACTTGTTACCGTCACCTCTAACCGCTTGCAGAATTCGCATACCGAATCCAGGCAGAGGCCTGAAGCTGAAGCACAGGATCCATTTGCTGCAAGAAAACTCCAGAAGGCAGACCGAGAGAAACTGAGGAGGGATCGACTAAATGAGCATTTCCTAGGGCTGGGAAACACATTAGATCCAGATAGGCCAAAGAATGACAAGGCCACTATCCTTACAGACACAATTCAGGTGCTAAAAGATTTAACTGCTGAAGTCAATAGACTAAAAGCTGAGCATGCTGCACTTTCTGGAGAATCACATGAACTAATGCAAGAGAAAAATGAACTCAGAGAAGAGAAGTCATCTCTAAAATCTGACATTGAAAATCTTAATGCACAGTATCAGCAGAGAGTCAGAGTCACATTCCCATGGACTGCAATCGATCATTCAGTTGTCATGGCTCCACCGTATTCGTATCCGGTTCCTATACCCATTCCTTCCGCTCCAATTTCCCTTCATCCATCACTTCAGCCTTTTCCTTTCTTTGGAAACCAAAATCCAGGTCCGATTCCCAATCCTTGTTCCACATATGTCCCCTTTTCTGCTCCAGCTAATCCCCCGGTCGAGCTGCCAACTGGCCAATATGCTTCAACATCCAACACTTCGAGCAAACAAGATTCCAGAAGTAAGTCGCCAGATCATGAAAGGACCGGCAATGCTGAAAGATGTGGTGAGTCTAACGATGTAGCTACGGAGCTTGAACTTAAGATGCCTGGATCATCATTGCGGCAGGAATCATCTTCTGGAGCAAGGAAGGGCAAGCATTCATTAAGGAAGGAGAGAAATATCACAGATGGGAGTACTTCAAGTAGGCATTCTTCATCGCGAGGACCTCAAGATAGCTCCAACAGCGTGGGTGACATCCCGAAGGCTGATAAATCATAG 1551 0.4571 MATSSATNSFCFLQAHILSPSPLLLPPLLSLKPHKLTSSFITPPQSSAQTGFSRQDSRMQYNGVKMKYLHNLIQVLESRVYVICFGGIKPEVDSLFSVTGASGEDICLQNVSCDVANRISKNHLDGHIEVAKQVRSFGGLMKEEGRWDVQCKEDLKMEKQGLSFLGHAHARSSFCRCFCLEMDRWKPEDLSKSASVAADFAPSSHQPQSQLVTVTSNRLQNSHTESRQRPEAEAQDPFAARKLQKADREKLRRDRLNEHFLGLGNTLDPDRPKNDKATILTDTIQVLKDLTAEVNRLKAEHAALSGESHELMQEKNELREEKSSLKSDIENLNAQYQQRVRVTFPWTAIDHSVVMAPPYSYPVPIPIPSAPISLHPSLQPFPFFGNQNPGPIPNPCSTYVPFSAPANPPVELPTGQYASTSNTSSKQDSRSKSPDHERTGNAERCGESNDVATELELKMPGSSLRQESSSGARKGKHSLRKERNITDGSTSSRHSSSRGPQDSSNSVGDIPKADKS 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0091 516 Coils Coil 280 335 - -
Lele51g0091 516 CDD bHLH_AtILR3_like 245 319 - -
Lele51g0091 516 SMART finulus 246 296 IPR011598 GO:0046983
Lele51g0091 516 MobiDBLite consensus disorder prediction 470 488 - -
Lele51g0091 516 MobiDBLite consensus disorder prediction 199 249 - -
Lele51g0091 516 Pfam Helix-loop-helix DNA-binding domain 241 290 IPR011598 GO:0046983
Lele51g0091 516 MobiDBLite consensus disorder prediction 413 428 - -
Lele51g0091 516 MobiDBLite consensus disorder prediction 429 444 - -
Lele51g0091 516 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 240 290 IPR011598 GO:0046983
Lele51g0091 516 MobiDBLite consensus disorder prediction 407 516 - -
Lele51g0091 516 PANTHER TRANSCRIPTION FACTOR BHLH121 203 513 IPR044579 GO:0003700|GO:0055072
Lele51g0091 516 MobiDBLite consensus disorder prediction 199 223 - -
Lele51g0091 516 Gene3D - 239 316 IPR036638 GO:0046983
Lele51g0091 516 MobiDBLite consensus disorder prediction 489 510 - -
Lele51g0091 516 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 240 311 IPR036638 GO:0046983
Lele51g0091 516 MobiDBLite consensus disorder prediction 224 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0091 Lele-ChrLele51 518942 525248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0091 231 480 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 53.333 7.59e-75 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele51g0091 HLH 1.3e-07 No_clan