Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0079 ATGGCACCTAAACAAGATAGAGAGGTGATTTCTTCTCAGAATTCTGTATATTCACCATCTTCAACCTCACCAATGGGTAGCAGATTCAGACTTGTGTTTGATAGATTATGGGCTTTTGCCTCTTCTTTGAAGACAAGCAGCACACCACGTGGTCGACGAATTTTCCACAGAGATGTCGAAAAAGAAGAATTCCAGTATGCCAGTACTCAATGCCTCTCATCCTACTACAGTGTCTTCGTGGTTCGCCTGGCAATCATGGCTATGCTAGCCATCTTGATTGGGCTGCTCACTATATTAACATGGCATTTCACCAAGAGTTATACGGCAAAATCACTTGATAACTTGGCATATGGGCTTCGTTATGAATTACTACAACGCCCCATCTTACGGATGTGGAATATTTTGAATTCTACTGCTGAAATTACAAAAGCTCAGGTTGAGCTTTCTGAGTATGTCATCAGACGATACAGCAACCCTGCCAATCAAGCAGAACAAGTTGAGCTGTACGAAGCTATGAGGTCTGTAACCTGGGCCCTCTTCTCTAGCAGCAAAGCACTCAATTCAATAACTATCAATTACAGGAACGGCTTTGTTCAGGCATTCCACAGAGATCTTAAGGATAACAATACATTTTACATCTACTCTGATCTTGCAAACTACTCCATAGGTGCCAATGAGATGAAATCACTCTCAACACATCAAGCTTGGAACGATCAAGCCATCCGTGGTAACAGTTCTGCAACTTGGTATCGTGAACCACTTGACCCTCTTAGTGGTGTGAAGATTGGAAAAGCTAAGAAGATTGCGCCAGAAGACTTGATTAATATTGCTGGCATTTCTCAAGTCCCTGATGGGGCAGCTTCATGGCATGTTGCTGTGAGCAAGTTCACGGATTCACCATTGCTTTCTGCTGCGCTGCCAGTTTGGGACTCTTCTAATAAGAGCATTGTGGCAGTTGTGGGTGTCACAACCGCACTTTATAGTGTTGGCCAGCTAATGAAAGAACTAGTTGAATTTCATAGTGGTTATATCTATTTGACCTCCCTGGAGGGTTACTTACTTGCCACTTCCACAAATGCTCCACTGCTAACAAATTCAAAGCCTCTCAAGCTTAAGATGGCTGTTGATTGTGAAGATGATGTAATACGATTGGGAGCCCAGTGGCTGAATAGAACCTACGGGAAGAATTTTCCTCCAAGTCATGGGGTTCACTTAGAGAATGTCAAGCTAGGCCATCAGCAATATTACATCGACTCATTCTTTTTAAATTTGAAGAGGCTTCCTCTGGTGGGTGTTATCATTATTCCAAGAAAGTATATTATGGGGAAGGTTGATCAAAGAGCCTTCAAAACATTGGTTATTCTGATATCTGCATCGTTGTGTATTCTAGTCATTGGATGTGTTTGCATTCTAATTCTGACAAATGGGGTATCAAAGGAAATGAAACTAAGAGCGGAACTAATCAGTCATCTGGAAGCAAGAAGGAAGGCAGAGGCATCAAGCAATTATAAAAGTCAGTTTCTTGCAAACATGAGTCATGAATTGAGGACACCTATGGCAGCAGTGATTGGGTTGCTTGACATTCTTATATCTGATGATTGCCTAACAAATGAACAGTATGCAACAGTTACTCAGATAAGAAAATGCTCAACTGCTTTACTCCGTCTTCTTAACAACATTTTGGATATCAGCAAGGTGGAATCCGGAAAATTGGTGTTAGAAAATGCAGAATTTGATTTGGGACGGGAACTTGAAGGGCTTGTAGATATGTTTTCTGTGCAGTGCATTAACCACAACGTAGAGACTGTTTTGGACCTATCAGATGATATGCCAAAGGTAGTTCAGGGTGATTCTGCTAGAGTTGTTCAAATTTTTGCAAACTTGATCAACAATTCAATTAAGTTCACTCCATCTGGTCACATTATTCTTCGAGGATGGTGCGAGAATCCCAATTGTTCCAGTGATAGCCAAAATCTTCCTATTAATCAGAAGTCCCGGGCTCCACAAAAGACCCGAATGAAGCAACAAGGAAACCATGCAAAGAAGGCATCCAAAAAAGACAACCAAATAATTCTTTGGTTTGAAGTAGATGACACAGGCTGTGGTATTGATTCAAGTAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAAGCAGATCCGTCAACCACTAGATTGCATGGTGGCACCGGTCTTGGACTTTGCATTGTGAGAACCTTGGTCAATAAGATGGGTGGAGAAATCAAGGTTGTCAAAAAGGAAGGCCCAGGAACCCTGATGCGTTTGTACCTGCTTCTCAGTACACCCATGGATGCCACAGAACAACATTGTCAAATAGATTATGAGGAGAATGGCTTAGTGACTATGAAAGTAGAAATATCATTGCAGATATTGCTTGCACTACATGGAGACACGGGTCGATCTATCACATCTAAATGGTTACAGAAAAATGGGGCTTGCACTCTAGAGGCGTCTGAATGGAATGAACTGACGCAAATTCTGAGGGAACTCTTCCATGCAAGTTCAGTCCACCACAATGGCTTTGATGCACATTATGCAGTAAGTAAGAGTTGGAAGTCCAAATTACTAAGCATAGAAGAGATGAGGAACCCAACATTTGTGATTATAGTGGATATAGGGCTGCTTGATTTAAGCACAGATATATGGAAGGAACAGCTCAACTTCCTTCACAAGTACTTTGGCAGAGCAAAGTTCGCATGGGTGCTAAATCATGACACCTCTAATACCATAAAGATGGTGCTTCGCAGGAAGGGGCATATATTGATGGTCAACAAGCCCCTCTACAAGACCAAAATGTTTCATATTCTGGAAGCTGTCATAAAGGAGAGAAATGTTGAGCTGCAAAAGAATAATATGACTGCCTCAAGAACCACGACTAAAGAGGGAAATGCGCACGAGTTTCTGGAGATTGATTCTACTCATTTTGATGGTGCTAGCTCTGATGGTTCTGACATATCAGAAACGGGTGCTTCTAATAGTGCCATTGGAGAAAAACGTAGGGAAAATATTGTAAAATCCCATCCACCAGCAGAGTACAACAAAAACAGTTGCCTCGTTGGATTAACCGATGAATACGCAGAAGATAACATTTCAAGGAAAGAAGAATCATGTCAGAGTAGCCCCAACTGCCGTGACAGCCTTGAAGGCACAGAACCAAGAGTACAAGCATCCTTTCCCTCGGAAGCTCAAGAAAAAGATTCTGGTTCTAGGAAAACATTTGGTGTCACTTGCTCAAGTAAAACTGTTAATGGAAAGAAATCTCTTGAAGGTCTGAGGATATTGCTCGCAGAAGACAATCCAGTACTTCAAAGAGTTGCAACCATAATGTTGGAAAAAATGGGAGCTACAGTAGTTGCAGTCGGAGATGGACAGCAGGCTGTGGATGCTCTGAATTGCATGCTCGGCGCTGAAGATAACAGAAGGGAGTCTCTAGGGAAGGAGAGAAGCGCAATATCTCAAACAGAAATTATCAGCTGCACACCTTATGATTTGATCCTAATGGATTGTCAGATGCCAAAGATGGATGGTTATGAAGCGACAAAAGCAATAAGGAAATCAGAAGCAGGAACAGGATCGCACATTCCCATAGTTGCTCTTACGGCGCACGCAATGTCATGTGATGAGGCTAAGTGCCTGGAGGTGGGCATGGATGCTTATTTAACAAAGCCAATTGACTTCAAGCTGATGGTGTCCACCATTCTTTCACTCACTAAAACAACATCCTGA 3744 0.4212 MAPKQDREVISSQNSVYSPSSTSPMGSRFRLVFDRLWAFASSLKTSSTPRGRRIFHRDVEKEEFQYASTQCLSSYYSVFVVRLAIMAMLAILIGLLTILTWHFTKSYTAKSLDNLAYGLRYELLQRPILRMWNILNSTAEITKAQVELSEYVIRRYSNPANQAEQVELYEAMRSVTWALFSSSKALNSITINYRNGFVQAFHRDLKDNNTFYIYSDLANYSIGANEMKSLSTHQAWNDQAIRGNSSATWYREPLDPLSGVKIGKAKKIAPEDLINIAGISQVPDGAASWHVAVSKFTDSPLLSAALPVWDSSNKSIVAVVGVTTALYSVGQLMKELVEFHSGYIYLTSLEGYLLATSTNAPLLTNSKPLKLKMAVDCEDDVIRLGAQWLNRTYGKNFPPSHGVHLENVKLGHQQYYIDSFFLNLKRLPLVGVIIIPRKYIMGKVDQRAFKTLVILISASLCILVIGCVCILILTNGVSKEMKLRAELISHLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYATVTQIRKCSTALLRLLNNILDISKVESGKLVLENAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPKVVQGDSARVVQIFANLINNSIKFTPSGHIILRGWCENPNCSSDSQNLPINQKSRAPQKTRMKQQGNHAKKASKKDNQIILWFEVDDTGCGIDSSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRTLVNKMGGEIKVVKKEGPGTLMRLYLLLSTPMDATEQHCQIDYEENGLVTMKVEISLQILLALHGDTGRSITSKWLQKNGACTLEASEWNELTQILRELFHASSVHHNGFDAHYAVSKSWKSKLLSIEEMRNPTFVIIVDIGLLDLSTDIWKEQLNFLHKYFGRAKFAWVLNHDTSNTIKMVLRRKGHILMVNKPLYKTKMFHILEAVIKERNVELQKNNMTASRTTTKEGNAHEFLEIDSTHFDGASSDGSDISETGASNSAIGEKRRENIVKSHPPAEYNKNSCLVGLTDEYAEDNISRKEESCQSSPNCRDSLEGTEPRVQASFPSEAQEKDSGSRKTFGVTCSSKTVNGKKSLEGLRILLAEDNPVLQRVATIMLEKMGATVVAVGDGQQAVDALNCMLGAEDNRRESLGKERSAISQTEIISCTPYDLILMDCQMPKMDGYEATKAIRKSEAGTGSHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPIDFKLMVSTILSLTKTTS 1247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0079 1247 MobiDBLite consensus disorder prediction 1037 1080 - -
Lele51g0079 1247 MobiDBLite consensus disorder prediction 657 684 - -
Lele51g0079 1247 MobiDBLite consensus disorder prediction 657 674 - -
Lele51g0079 1247 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 616 765 IPR003594 -
Lele51g0079 1247 ProSiteProfiles Histidine kinase domain profile. 510 767 IPR005467 -
Lele51g0079 1247 Gene3D - 1081 1245 - -
Lele51g0079 1247 CDD REC_hyHK_CKI1_RcsC-like 1099 1239 - -
Lele51g0079 1247 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 558 763 IPR036890 -
Lele51g0079 1247 MobiDBLite consensus disorder prediction 1 24 - -
Lele51g0079 1247 PRINTS Bacterial sensor protein C-terminal signature 727 745 IPR004358 GO:0016310|GO:0016772
Lele51g0079 1247 PRINTS Bacterial sensor protein C-terminal signature 710 720 IPR004358 GO:0016310|GO:0016772
Lele51g0079 1247 PRINTS Bacterial sensor protein C-terminal signature 692 706 IPR004358 GO:0016310|GO:0016772
Lele51g0079 1247 SMART HKATPase_4 616 767 IPR003594 -
Lele51g0079 1247 MobiDBLite consensus disorder prediction 7 24 - -
Lele51g0079 1247 Gene3D - 571 768 IPR036890 -
Lele51g0079 1247 CDD HisKA 504 565 IPR003661 GO:0000155|GO:0007165
Lele51g0079 1247 Pfam Response regulator receiver domain 1099 1238 IPR001789 GO:0000160
Lele51g0079 1247 MobiDBLite consensus disorder prediction 1062 1080 - -
Lele51g0079 1247 PANTHER TWO-COMPONENT HISTIDINE KINASE 64 775 - -
Lele51g0079 1247 Gene3D - 491 570 - -
Lele51g0079 1247 Pfam His Kinase A (phospho-acceptor) domain 504 569 IPR003661 GO:0000155|GO:0007165
Lele51g0079 1247 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 490 570 IPR036097 GO:0000155|GO:0007165
Lele51g0079 1247 SUPERFAMILY CheY-like 1095 1243 IPR011006 -
Lele51g0079 1247 SMART REC_2 1097 1239 IPR001789 GO:0000160
Lele51g0079 1247 FunFam Histidine kinase 1-like protein 491 570 - -
Lele51g0079 1247 SMART HisKA_10 503 569 IPR003661 GO:0000155|GO:0007165
Lele51g0079 1247 ProSiteProfiles Response regulatory domain profile. 1098 1243 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0079 Lele-ChrLele51 459987 465975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0079 23 1247 Histidine Kinase Gene Family AT2G17820 64.895 0.0 1570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele51g0079 HATPase_c 1.8e-21 CL0025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0546 54 11916723 11920617 Lele51g0079 51 459987 465975 CCT
Lele56g0888 56 7465705 7478449 Lele51g0079 51 459987 465975 CCT
Lele51g0079 51 459987 465975 Lele51g0079 51 459987 465975 ECH
Lele49g0071 49 428648 434652 Lele51g0079 51 459987 465975 hybridization
Lele50g0082 50 514715 527701 Lele51g0079 51 459987 465975 hybridization