Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0057 ATGGGTGATCGGCACCGCCATTTATTGGCTGCTCCACCGCCGGAACTGGCAAAGCCACTCAATTCCAAAAGCAGTTCCCATCAAACTATGTTGGTAGGGTTTGTTTCAGGCATTTTAGCAGCAATGGTAGTTGCATTATTATTGTACTGCCTCTTCAAGAGAAATGGTATTCCACTTAAATGCAAAAGGGGTTCTTCGAAAGGTGCAAAAGATGGAAAGAGTTTGAAATATGATAAGATAACGTTGAGGCGTTTTGATTTTGAGGAACTAGAGAAGGCTACAAATAATTTTAGTCCAGATTGCTTGCTGGGTTCTGGTGCATTTGGAATGGTGTACAAAGGAACCTTTAAATTAGAAGGAACATTAGCCATTAAAAGAGCTAATGGTGAATCATTCTTAAGCAAGGAAGAGTTCAGAAACGAAGTGAGCCTCATTTCGAAAGTAAATCACAGGAATCTTGTTAATTTGGTGGGATATTGTGAAGAACCTGGAGATGGGGTCCAAATGCTGGTTTATGAGTATGTGCCTAACGGTTCTCTGCTCGAGTACATGATGGGAAAAAGAGGGAAGAGCTTAACTTGGAGGCAAAGAGTAAACGTAGCAATAGGAGCAGCTAAAGGTATAGCTCATTTGCATGAAGGGGTGAAACCAAGTATAATACATCGTGATATAAAACCGAGCAACATCTTAATAGGGGAAAGGTTTGAGGCTAAAGTTTCAGATTTTGGGTTGATAAAATCCGGACCAACTGGTGATCAATCTCATGTTAGCAGCCAAATCAAAGGAACCCCAGGATACCTTGATCCCACTTATTGTTCAACCTTTCATTTGACCACTTTCAGTGACGTTTACAGTTTCGGAGTCATACTTCTCCAACTTATTTCCACTAGACCAGCCGTTGATTCCACAAAAAGTCAAAATATTTCTCATATTTTTGATTGGGCAAGGCCTAGCTTAGAGAAGGGTAATGTTGAAGAAATCATAGATGCCAATTTACTATGTGAGCCTTGCAATATGAAGGTTATGTTGAAGATGGGTCAGCTTGCCCTCCGATGTGGGGCTCAAGCACCAAAGCATCGTCCTACAATGACTCAAGTATGTCAAGAGCTACAAGAAGCTCTCCGTGCCGCTGATAGCTTGATTGGCAAACTACCTTCGAAAAATTTCAGAAAATCAAGTAGCACATCTCAAGAATTAACAGAATCAGAGGTTCTCAAATCTATAGAAAACTATGACCGTTCGCAGAGTTTTGTAAGCATAGATGGTGTTGGGTTCCAGAAGTTTCATATTGATATGGATAATTTATCCTTTCAAAGTACAAGCTTAAGATGCCTAGAAAATAATAGTATTAGCATTGACACTGATGTCAACACTTTGAGGAGAATTCAAGTAAGATATATAAGGCTATGA 1410 0.3986 MGDRHRHLLAAPPPELAKPLNSKSSSHQTMLVGFVSGILAAMVVALLLYCLFKRNGIPLKCKRGSSKGAKDGKSLKYDKITLRRFDFEELEKATNNFSPDCLLGSGAFGMVYKGTFKLEGTLAIKRANGESFLSKEEFRNEVSLISKVNHRNLVNLVGYCEEPGDGVQMLVYEYVPNGSLLEYMMGKRGKSLTWRQRVNVAIGAAKGIAHLHEGVKPSIIHRDIKPSNILIGERFEAKVSDFGLIKSGPTGDQSHVSSQIKGTPGYLDPTYCSTFHLTTFSDVYSFGVILLQLISTRPAVDSTKSQNISHIFDWARPSLEKGNVEEIIDANLLCEPCNMKVMLKMGQLALRCGAQAPKHRPTMTQVCQELQEALRAADSLIGKLPSKNFRKSSSTSQELTESEVLKSIENYDRSQSFVSIDGVGFQKFHIDMDNLSFQSTSLRCLENNSISIDTDVNTLRRIQVRYIRL 469
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0057 469 Gene3D Transferase(Phosphotransferase) domain 1 175 388 - -
Lele51g0057 469 ProSiteProfiles Protein kinase domain profile. 97 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g0057 469 SMART serkin_6 97 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g0057 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Lele51g0057 469 PANTHER OS01G0750732 PROTEIN 26 396 - -
Lele51g0057 469 SUPERFAMILY Protein kinase-like (PK-like) 76 370 IPR011009 -
Lele51g0057 469 Gene3D Phosphorylase Kinase; domain 1 69 174 - -
Lele51g0057 469 CDD STKc_IRAK 103 372 - -
Lele51g0057 469 Pfam Protein tyrosine and serine/threonine kinase 102 370 IPR001245 GO:0004672|GO:0006468
Lele51g0057 469 FunFam Putative LRR receptor-like serine/threonine-protein kinase 66 174 - -
Lele51g0057 469 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 175 384 - -
Lele51g0057 469 ProSitePatterns Protein kinases ATP-binding region signature. 103 125 IPR017441 GO:0005524
Lele51g0057 469 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele51g0057 Lele-ChrLele51 348071 350084 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0057 28 400 Receptor kinase-like Gene Family AT1G51850 39.267 3.99e-77 256
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele51g0057 PK_Tyr_Ser-Thr 3.7e-41 CL0016