Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0054 ATGATCAGATGGGAACGAAAACTCAACGTTTTTATTAAGTTCAATGGCATTCATTGCTTCTATATATCAGTTGATAAGATCAAGCTCATAGTTATCACTTCAATATCTTGCCCTGCAATTCCAGCTCCTCACTGCTCTTGTTTCCTCAGATCGGATTCTGAATGCAATCCTTCCAGCTTTGCAATGGCAAAGCCCAAGCACTCTCGCCTACCTCCTCGCAAATCCTCTTCTTCAACTCTCATCCTCTCCTTTACTTTTTTGTTCGCCTTCCTCCTCATTCTTCTTGTATCCTTTGGGATCCTTTCCCTTCCCAGTAGCTCCCGTCGTGATGCACACGTGGCCAACGATCTTAACTCCATTGTTCGGAGCACGCTTGATAAAAGAGAGGGTGAAGAGAGGAGTGAGCAGTGGGTTGAACTAATATCTTGGGAGCCTAGAGCTTTTGTTTATCACAATTTTTTGACAAAGGAGGAATGTGAATACCTAATTAATCTAGCCAAGCCTCATATGCAGAAGTCAACAGTTGTTGATAGCGAAACTGGAAAGAGTAAAGATAGCAGAGTACGTACAAGTTCTGGAACTTTTCTACCCAGAGGACGTGATAAGATTGTGAGGAATATTGAGAAAAGGATTGCTGATTTTACTTTTATCCCTGTAGAGCATGGCGAAGGACTGCAAGTGCTCCACTATGAAGTTGGACAAAAGTATGAGCCTCACTATGACTACTTTCTTGATGAGTTTAACACTAAGAATGGCGCTCAGCGGATAGCTACAGTACTTATGTATCTCACAGATGTTGAAGAAGGGGGTGAGACAGTGTTCCCAGCTGCCAAGGGAAACTTTAGCTCTGTGCCATGGTGGAATGATCTCTCTGAATGTGGAAAGAAAGGACTTTCAATTAAGCCAAAGATGGGTGACGCTCTACTTTTCTGGAGCATGAAGCCTGATGCAACTTTAGATGCCTCTAGTTTGCATGGTGGTTGTCCAGTGATTAAGGGCAATAAATGGTCAAGTACCAAGTGGATGCGCGTCAATGAATACAAAATTTGA 1050 0.4286 MIRWERKLNVFIKFNGIHCFYISVDKIKLIVITSISCPAIPAPHCSCFLRSDSECNPSSFAMAKPKHSRLPPRKSSSSTLILSFTFLFAFLLILLVSFGILSLPSSSRRDAHVANDLNSIVRSTLDKREGEERSEQWVELISWEPRAFVYHNFLTKEECEYLINLAKPHMQKSTVVDSETGKSKDSRVRTSSGTFLPRGRDKIVRNIEKRIADFTFIPVEHGEGLQVLHYEVGQKYEPHYDYFLDEFNTKNGAQRIATVLMYLTDVEEGGETVFPAAKGNFSSVPWWNDLSECGKKGLSIKPKMGDALLFWSMKPDATLDASSLHGGCPVIKGNKWSSTKWMRVNEYKI 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0054 349 FunFam Prolyl 4-hydroxylase 4 137 344 - -
Lele51g0054 349 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 221 344 IPR005123 -
Lele51g0054 349 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 110 343 IPR045054 -
Lele51g0054 349 Gene3D q2cbj1_9rhob like domain 138 344 - -
Lele51g0054 349 SMART p4hc 145 343 IPR006620 GO:0005506|GO:0016705|GO:0031418
Lele51g0054 349 Pfam 2OG-Fe(II) oxygenase superfamily 225 343 IPR044862 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0054 Lele-ChrLele51 315600 322332 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele55g0211 55 1322323 1324723 Lele51g0054 51 315600 322332 CCT
Lele49g0048 49 308748 315025 Lele51g0054 51 315600 322332 hybridization
Lele50g0056 50 384720 388129 Lele51g0054 51 315600 322332 hybridization