Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele51g0049 | ATGGCGGATTCTCCTCTCAGAAGGACTTCAAGGTCTCCGTCCCCCTGGAGAGCCCAGTCTAGATCGAGATCCAGGTCAAAGACTCCGCCCAGGGCTAGGTCAAGGTCTCGTTCTAGATCAAGATCCAGGTCAAGACACAGGCCCAGGTCCCGTTCAAGAAGCCGGGGCAGATCAAGGTCAAGAAGTCATGGAAGGCCTGAATCTTTAAATCCTGGGAATACACTCTATGTTACTGGTCTATCTTCAAGGGTTACTGAGAGGGGCCTAGAAGAGCACTTTTCTAAGGAAGGAAAGGTTGCTTCATGTTTCCTTGTGGTGGAGCCTCGTACACGTATTTCCCGCGGTTTTGCTTTTGTTACGATGGATACTGTTGAGGATGCTAACCGCTGTATCAAGTATCTTAATCAATCTGTACTTGAAGGTCGCTATATTACAGTTGAACAGGTAATGGGATTTCCTCTTGGTTAG | 468 | 0.4808 | MADSPLRRTSRSPSPWRAQSRSRSRSKTPPRARSRSRSRSRSRSRHRPRSRSRSRGRSRSRSHGRPESLNPGNTLYVTGLSSRVTERGLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDTVEDANRCIKYLNQSVLEGRYITVEQVMGFPLG | 155 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele51g0049 | 155 | MobiDBLite | consensus disorder prediction | 1 | 77 | - | - | |
Lele51g0049 | 155 | SMART | rrm1_1 | 74 | 147 | IPR000504 | GO:0003723 | |
Lele51g0049 | 155 | MobiDBLite | consensus disorder prediction | 24 | 60 | - | - | |
Lele51g0049 | 155 | CDD | RRM_RBMX_like | 72 | 148 | - | - | |
Lele51g0049 | 155 | PANTHER | TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED | 61 | 148 | - | - | |
Lele51g0049 | 155 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 75 | 144 | IPR000504 | GO:0003723 | |
Lele51g0049 | 155 | FunFam | RNA-binding (RRM/RBD/RNP motifs) family protein | 3 | 151 | - | - | |
Lele51g0049 | 155 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 73 | 151 | IPR000504 | GO:0003723 | |
Lele51g0049 | 155 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Lele51g0049 | 155 | Gene3D | - | 11 | 151 | IPR012677 | - | |
Lele51g0049 | 155 | SUPERFAMILY | RNA-binding domain, RBD | 32 | 147 | IPR035979 | GO:0003676 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele51g0049 | Lele-ChrLele51 | 300563 | 302654 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele51g0049 | 70 | 147 | Eukaryotic Initiation Factors Gene Family | AT3G11400 | 35.897 | 9.57e-08 | 48.1 |