Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0043 ATGCGGAGGATCTCGCGGCCCTGTTTGTCTTTGCCTTTGATCTTGAAGGCCTCCAATTTGAGAAGCAATTCTTCATGTTCGAGGTCGGAGATGGAAGAAATCCCATTCATATTCCTCGTAGTTCTTGAAGCGGTTTGTGTGGAAATGCGAAGGCAAATAAGGAAAGCCATTTCCCTCACATCACTCATCAAACATGTTCCCCACAACTCTCCTTCTTACGCCACTTGCTCCATAAGCATTGACGACAGCAATATTAATAAAGCCTGTAGACATATGCTCCATACCAAAGACTGGGACGAGACAGAAATGGGGGTATCTCAGAAATGGTTGAAACTAGTTCGTAGAAAATTGCTGGGCTCATCCAATAGATATATAGCTATTCCTCGCACGCGCACCGGCACAATTTGTTCAAATGAGAGCGATAAAGCCTTTGTCTGGAGTGAAACTTCCACAATTGAAGACCATGGCTTGCCAGTCTTCAGAAAGGAAGATGAGGCGGCAATTAAGATTCAAGCTTGTTTCAGGGGTCACCTGGCAAGAAGAGCATATCGAGCTCTTAGAAGCCTGGTGAAGCTGCAAGCATTGGTTCGTGGGGTATTCGTGAGGAGACAATCACTCATAGCGTTGCACTGTATGCATGTACTCGTTCGCTTACAAGTCAGGATTCGTGCAAGGCAGCTTCTTGGCGGATCTCTCGCTGACTGA 705 0.4624 MRRISRPCLSLPLILKASNLRSNSSCSRSEMEEIPFIFLVVLEAVCVEMRRQIRKAISLTSLIKHVPHNSPSYATCSISIDDSNINKACRHMLHTKDWDETEMGVSQKWLKLVRRKLLGSSNRYIAIPRTRTGTICSNESDKAFVWSETSTIEDHGLPVFRKEDEAAIKIQACFRGHLARRAYRALRSLVKLQALVRGVFVRRQSLIALHCMHVLVRLQVRIRARQLLGGSLAD 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0043 234 SMART iq_5 162 184 IPR000048 GO:0005515
Lele51g0043 234 SMART iq_5 185 206 IPR000048 GO:0005515
Lele51g0043 234 Pfam IQ calmodulin-binding motif 165 184 IPR000048 GO:0005515
Lele51g0043 234 Pfam IQ calmodulin-binding motif 188 204 IPR000048 GO:0005515
Lele51g0043 234 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 206 IPR027417 -
Lele51g0043 234 PANTHER IQ-DOMAIN 5-RELATED 143 226 - -
Lele51g0043 234 Gene3D - 161 212 - -
Lele51g0043 234 ProSiteProfiles IQ motif profile. 163 191 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0043 Lele-ChrLele51 273607 274559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0043 103 228 IQD Protein Family AT3G51380 50.794 1.78e-30 107