Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0032 ATGCTTTTTCTGGAAATTGTTGTGGCTGTGGATTCGACTTGTGACATTTTTTCTAGCAAACGCAGACAATTCACCAACTCCCGCATCTCTTTATATAGTTTCTTCCCTCCTCTTTCGGGCCAAACGATTTCTTCCTTAAATTGGCATCTTTCCCAGCGCAAACAAAAAGGCCCTGTTTGGTCTCATCATCCCTCCTCTCTCTCCCTCCCTCTCTGCCCACTGGAAATCTTGAGCACCATGTCAATGGCAACTTCTCCCCACACTAATTTTCTCCAAAACCCTAATCGCCTCCTCAAGAACCCCACCACGCAAAACGACGTCTTTCCTGTTACCTCCATATGCAGCATCAAGAATACCCCAATCAGACCTGCTTCGATCAAATGCGCAGCCCCAACTGCCACCCAAATCCAGGATCGTTTTCCGGGTCAGACCCAATCCCAAGATCGGGTCTTCAACTTCGCCGCTGGACCGGCGACGCTGCCGGAGAACGTACTCTTGAGAGCTCAGTCGGAGCTCTACAACTGGCACGGATGCGGCATGAGCGTGATGGAGATGAGCCACAGAGGTAAGGAGTTTCTGTCCATAATCCAGAAGGCCGAAGCAGATCTGCGTGCCCTATTGGAGATTCCACCGGAATATGCTGTTATGTTCTTGCAAGGCGGCGCCACCACCCAGTTCGCCGCGGTGCCGTTGAACCTCTGTAAGCAGGACGATTCGGGGGATTATTTGGTCACTGGGTCTTGGAGCGACAAGGCCTTCAAGGAGGCCCAGAAGTACTGCAAACCGAACGTGATTTGGTCTGGTAAATCTGAGAAGTACATGAAGATTCCATCTTTTGATGTGTTGGAGCAGAACCCGCAGGCAAGGTATCTGCATATATGTGCGAATGAGACGATTCAAGGGGTGGAGTTCAAGGATTACCCCACCCCAAAGAATCCAAATGGTATTTTGGTTGCAGACATGTCTTCAAATTTCTGTTCAAAGCCAGTGGATGTGTCCAAATTTGGTGTGATCTATGCTGGAGCGCAGAAGAATGTAGGGCCTTCCGGTGTGACTATTGTGATCATAAGGAAAGATCTGATAGGGAATGCTCAGGATGTGACTCCTGTGATGCTTGATTACAAGATACAGTCTGAGAACAACTCGTTGTACAATACTCCTCCTTGTTATGGCATTTATATGTGTGGGTTGGTCTTTGAGGACCTGTTGGATCAAGGGGGTCTGAAGGAGGTTGAGAAGAAGAACAAGAAGAAGGCTGAAATTCTGTATGACGCCATTGATGCTAGCGATGGGTTCTACAGATGCCCAGTTGAGAAGTCTGTGAGGTCGTTGATGAATATTCCATTTACAATGCAGAAATCAGAATTAGAGGCTGATTTTATTAAGGAGGCAGCCAGGGAGAAGATGGTTCAGCTTAAGGGACACAGGTCGGTGGGTGGCATGAGAGCTTCCGTATACAATGCCATGCCTTTGGCTGGGGTTGAGAAGTTGGTGGCCTTCATGAAGGATTTCCAGGCGAGGCATGCATAG 1530 0.4863 MLFLEIVVAVDSTCDIFSSKRRQFTNSRISLYSFFPPLSGQTISSLNWHLSQRKQKGPVWSHHPSSLSLPLCPLEILSTMSMATSPHTNFLQNPNRLLKNPTTQNDVFPVTSICSIKNTPIRPASIKCAAPTATQIQDRFPGQTQSQDRVFNFAAGPATLPENVLLRAQSELYNWHGCGMSVMEMSHRGKEFLSIIQKAEADLRALLEIPPEYAVMFLQGGATTQFAAVPLNLCKQDDSGDYLVTGSWSDKAFKEAQKYCKPNVIWSGKSEKYMKIPSFDVLEQNPQARYLHICANETIQGVEFKDYPTPKNPNGILVADMSSNFCSKPVDVSKFGVIYAGAQKNVGPSGVTIVIIRKDLIGNAQDVTPVMLDYKIQSENNSLYNTPPCYGIYMCGLVFEDLLDQGGLKEVEKKNKKKAEILYDAIDASDGFYRCPVEKSVRSLMNIPFTMQKSELEADFIKEAAREKMVQLKGHRSVGGMRASVYNAMPLAGVEKLVAFMKDFQARHA 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0032 509 Gene3D - 163 403 IPR015421 GO:0003824
Lele51g0032 509 PANTHER PHOSPHOSERINE AMINOTRANSFERASE 145 509 IPR022278 GO:0004648|GO:0006564
Lele51g0032 509 ProSitePatterns Aminotransferases class-V pyridoxal-phosphate attachment site. 335 354 IPR020578 -
Lele51g0032 509 Gene3D Aspartate Aminotransferase, domain 1 405 509 IPR015422 GO:0003824
Lele51g0032 509 Hamap Phosphoserine aminotransferase [serC]. 148 508 IPR022278 GO:0004648|GO:0006564
Lele51g0032 509 Pfam Aminotransferase class-V 150 497 IPR000192 -
Lele51g0032 509 CDD PSAT_like 151 505 IPR022278 GO:0004648|GO:0006564
Lele51g0032 509 FunFam Phosphoserine aminotransferase 162 404 - -
Lele51g0032 509 SUPERFAMILY PLP-dependent transferases 148 506 IPR015424 -
Lele51g0032 509 TIGRFAM serC_1: phosphoserine transaminase 150 508 IPR022278 GO:0004648|GO:0006564
Lele51g0032 509 FunFam Phosphoserine aminotransferase 405 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0032 Lele-ChrLele51 218397 219926 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0030 49 204026 205318 Lele51g0032 51 218397 219926 hybridization
Lele50g0035 50 252414 253706 Lele51g0032 51 218397 219926 hybridization