Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0031 ATGGTCATTTCCGATCACAGCAATCCTAACCTAATCAAACCCACAAATTTCCAAGAAATGGGAACCAGGAAGTTTGGGAACAACAGAAGAGCGTTAAGCGTGATAAATCAGACTCTATTGGAGGGTCGAGAGTATCCCTGCGTCGTTAACAAGAGGGCATTGTCTGATCAACATGAAATTTGTGAAAAGAAGCAGGCGGATCCGGTGCATCGACCGATCACCAGGAGATTTGCTGCTCAGATTGCTAGCACGCAACAATCTCACACAGAGGAACATAAGAAGCCAAACACGTCAATTCCAAACGGTAATGAATTTGGAGATGTCATATTCGTAGACGATGAACACAAGTCACCATCAGATCAGCCCGTGCCTATGTCATTAGAGCAAACAGAACCAACACATGATAAAGTGGATCAGATGGAAGAAGTTGAGATGGAAGATATAATTGAAGAGCCTATTGTAGACATCGATTCTGTTGATGCCAATAATCATCTTGCTGTGGTAGATTATGTTGAAGAACTTCATGACTACTACAGAAAGATGGAGAGTATTAGCTGTGTCGCACCGAATTATATGGCACAGCAAGATGACATTAATGAAAGGATGAGAGGTATACTGATTGACTGGCTTATTGAGGTTCACGATAAATTTGACCTCATGCATGAGACTTTGTTCCTAACCGTTAATCTCATAGATAGGTTTTTGGCAAAGCAAAACGTGATGAGAAAGAAACTCCAGCTGGTTGGCTTGGTTGCGATGCTTTTGGCATGCAAGTATGAGGAAGTCTCTGTGCCCGTAGTAGGGGATCTGATCCTTATATCAGACAAAGCTTACACAAGGAAGGAAGTTCTAGAAATGGAGAAGTTGATTCTCAACACATTGCAGTTTAACGTGTCAGTTCCAACACCATATGTTTTTATGAGGAGGTTCCTGAAGGCAGCTGAAGCAGATAAGAAACTTGAGCTAGCAGCTTTCTTCTTGATGGATCTATCTCTCGTGGAGTATGAGATGTTGAAGTTCCCACCATCAATGCTAGCTGCAGCTGCAGTCTATGCAGCTCAATGTACTACTTATGGTTTCAAACATTGGAGTAAGACGTGTGAATGGCACACCAAGTTCTCGGAAGATCAGTTGTTAGATTGCTCAAGGATGATGGTTGAGTTCCACCAGAAGGCGGTGACGGGGAAGCTTACAGGGGCATATAGGAAGTACTGCTCATCCAAGTTCAGCTCCATTGCAAAATGTGATCCGGCAAGTTTTCTTCTGGAGAACCGGTTGTAG 1281 0.4309 MVISDHSNPNLIKPTNFQEMGTRKFGNNRRALSVINQTLLEGREYPCVVNKRALSDQHEICEKKQADPVHRPITRRFAAQIASTQQSHTEEHKKPNTSIPNGNEFGDVIFVDDEHKSPSDQPVPMSLEQTEPTHDKVDQMEEVEMEDIIEEPIVDIDSVDANNHLAVVDYVEELHDYYRKMESISCVAPNYMAQQDDINERMRGILIDWLIEVHDKFDLMHETLFLTVNLIDRFLAKQNVMRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYTRKEVLEMEKLILNTLQFNVSVPTPYVFMRRFLKAAEADKKLELAAFFLMDLSLVEYEMLKFPPSMLAAAAVYAAQCTTYGFKHWSKTCEWHTKFSEDQLLDCSRMMVEFHQKAVTGKLTGAYRKYCSSKFSSIAKCDPASFLLENRL 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0031 426 SUPERFAMILY Cyclin-like 300 417 IPR036915 -
Lele51g0031 426 FunFam G2/mitotic-specific cyclin 187 294 - -
Lele51g0031 426 Pfam Cyclin, N-terminal domain 175 298 IPR006671 -
Lele51g0031 426 Gene3D - 174 414 - -
Lele51g0031 426 SUPERFAMILY Cyclin-like 162 298 IPR036915 -
Lele51g0031 426 Pfam Cyclin, C-terminal domain 301 417 IPR004367 -
Lele51g0031 426 Gene3D - 187 299 - -
Lele51g0031 426 PIRSF Cyclin_A_B_D_E 14 426 IPR039361 -
Lele51g0031 426 SMART cyclin_7 305 387 IPR013763 -
Lele51g0031 426 SMART cyclin_7 208 292 IPR013763 -
Lele51g0031 426 SMART Cyclin_C_2 301 418 IPR004367 -
Lele51g0031 426 CDD CYCLIN 299 386 IPR013763 -
Lele51g0031 426 FunFam G2/mitotic-specific cyclin-1 295 413 - -
Lele51g0031 426 PANTHER CYCLINS 120 391 IPR039361 -
Lele51g0031 426 CDD CYCLIN 202 291 IPR013763 -
Lele51g0031 426 MobiDBLite consensus disorder prediction 81 106 - -
Lele51g0031 426 ProSitePatterns Cyclins signature. 203 234 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0031 Lele-ChrLele51 214202 217297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0031 1 422 Core Cell Cycle Gene Families AT1G20610 56.813 2.77e-172 487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0031 51 214202 217297 Lele53g1249 53 21096988 21101468 CCT
Lele51g0031 51 214202 217297 Lele54g1222 54 17727771 17728237 CCT
Lele51g0031 51 214202 217297 Lele56g0225 56 1819773 1823218 CCT
Lele49g0029 49 200040 202694 Lele51g0031 51 214202 217297 hybridization
Lele50g0034 50 245776 249798 Lele51g0031 51 214202 217297 hybridization