Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0026 ATGTATAAAGGTCATTCTGGGACCTGTTTGCTGACCACTCTTCTAGTCTTTCAGAACACCATTAAAGAAGAGTTGATCAGGAGCGTGCATGTCTACCGACTGAGGGATGGGAGGGAAAGCGAGGTCGAAAGAGAGTTTGTATTTTCTCGGAGTGGCTCATACGGAGAAATGCGGGCTACCCCAATTCTTAGATTACAGAAATTTCGTGTTTCCGAAGTTTCTGAAGGGTATCAGAATGGAGTCTGGCTTTGTGTTTTTACGTTCCACGCCGATCACAATCTTCAGTGTTCGCGTGTTCCTCGGTTGTTATCAGTCACGAGGAATCCCAAGCTTCAGATGATCCCAACATTGCTTAATGATCTCCATATGATACATGAGTTGAACTGTAAATCAGAAGAGAATGATATGCTGCAAATCTCTCCCGATGAAAGATGCCAAGGAAACAGCAATGATAGCCATCAGCCAAGAAAAATTTTGCTCCAGGATCTCAACTGTCTTCCTTATCCAGATGACATGCCTGAGTTACAAGACAAGGAAGCAGATGAAGAAAGTTTAGGCATGTCTGAGATACCAGGGAATGAATCAGATGATGAAAGTTTAGACCCAGCTGAGTTACCAGACGATGACATCATTGACGAAAGTTTGCCAGGTAACATAGAGAAGAAAAAGAGGGCAGCTAGTAAAGATGTAGCAAGCATTGGTTTAGCAGATCTGGTGAAGTACTTTGATGTGCCAATTGTAGAAGCATCAAGAAATCTAAAAGTTGGACTTACTGTACTAAAGAGGAAATGCAGAGAATTTGGTATTCCCCGCTGGCCTCATAGGAAGATTAAATCGCTCGACAATCTCATTCATGATCTTCAGGAAGTGGCAGAAAATGAAGAAATAGAGAATGATGCTGCTGTTATGGCCGTGACAAAGAGGCAAAAGATGCTCGAGTGTGAAAAAGAAATTATTGAGAGGAAACCCTCCATGGACATCCAAAGAGAAACCAAGAGATTCAGGCAGGATGTCTTCAAGAGAAGGCACAGAGCTAGAGCTATGACAAAACAGAGCTCCATTTCTTTTGACCTGGAGACATTTGAAGCTCAGCAAACGCAAAGACAATTTCCAGTCAGAAATTCTACTTGTTCTGGAACAGTGTGGGCTTGGACTTGGGGGGTAGTATTGGCGGGAAGATTGCTGCTTCCCGGGAACAGTGGAAATGGTGCCTTGCGGGGGCCATTTTATGCTAGCTTCGTCGGCTGGGAGCTTGATATGGGTCTATGCTTTGGGTCTCCCGCTCACGATGACGGACCCGGGTCCAGTGTCAACAGAAATCCATATTCAGGTTCAGCGAGTACTGACAGTAGGAACGTGGGGTTCTCTACTACGAACAGCAGTGCTGCGAAGAGTCAATTTTCAGAACTAGCAAGTGGGAGCCTCGGGGATTCCCTTCCTTCCCCCAACGGGCAAATTCTAGAAACTCCAAACCTGAAGGTATTCAGTTTTGCAGACTTGAAAGCAGCCACAAAGAACTTCAAACACGATACATTGCTTGGTGAAGGTGGCTTTGGTAAAGTTTACAAAGGTTGGCTGGATGAGAAGACACTGACACCATCTAAGGCAGGGTCTGGAATTGTGGTTGCTATTAAAAAATTGAACCCAGAAAGTGTGCAAGGATTCCAAGAGTGGCAGTCAGAAGTCAATTTCTTAGGAAGGCTTTCTCATCCCAACTTGGTCAAGCTATTGGGTTACTGTTGGGATGCTGAGGAGCTGCTGCTTGTGTATGAGTTCATGCCAAAGGGAAGTTTGGAGAATCATCTCTTCAGAAGAAATCCTAACATCGAACCACTTTCTTGGAACATGCGACTCAAAATAGCTATTGGTGCAGCTCGAGGCCTGGCTTTTTTGCACACTTCAGAAAAGCAAGTGATATACAGAGATTTCAAGGCCTCAAATATACTACTTGATGGGAATTATAATGCAAAAATTTCTGACTTTGGCTTGGCGAAATTGGGGCCATCCGGGGGAGAATCACATGTTACAACTAGGGTTTTGGGCACTTATGGCTATGCTGCGCCAGAATATGTTGCTACAGGCCACTTGTATGTAAAGAGCGATGTGTATGGATTTGGTGTGGTGCTACTTGAAATGCTGACAGGTTTGAGGGCACTGGATACGAGGCGACCAAGCGGCCAGCAGAATCTGGTTGAATGGGGGAAGCCGTATCTGTCTAGCAAAAGAAAGTTGAAAACCGTTATGGACGCTAGGATTCAGGGTCAATATTCACTCAAGGCAGCATCACAGGCAGCTAAGCTTACTCTGAAATGCCTACAACCTGACCCTAGACACCGTCCTTCCATGAAAGAAGTAGTTGTGGAATTGGGAGGCATTGAAGAATCAAAGACAAAGTAA 2397 0.4481 MYKGHSGTCLLTTLLVFQNTIKEELIRSVHVYRLRDGRESEVEREFVFSRSGSYGEMRATPILRLQKFRVSEVSEGYQNGVWLCVFTFHADHNLQCSRVPRLLSVTRNPKLQMIPTLLNDLHMIHELNCKSEENDMLQISPDERCQGNSNDSHQPRKILLQDLNCLPYPDDMPELQDKEADEESLGMSEIPGNESDDESLDPAELPDDDIIDESLPGNIEKKKRAASKDVASIGLADLVKYFDVPIVEASRNLKVGLTVLKRKCREFGIPRWPHRKIKSLDNLIHDLQEVAENEEIENDAAVMAVTKRQKMLECEKEIIERKPSMDIQRETKRFRQDVFKRRHRARAMTKQSSISFDLETFEAQQTQRQFPVRNSTCSGTVWAWTWGVVLAGRLLLPGNSGNGALRGPFYASFVGWELDMGLCFGSPAHDDGPGSSVNRNPYSGSASTDSRNVGFSTTNSSAAKSQFSELASGSLGDSLPSPNGQILETPNLKVFSFADLKAATKNFKHDTLLGEGGFGKVYKGWLDEKTLTPSKAGSGIVVAIKKLNPESVQGFQEWQSEVNFLGRLSHPNLVKLLGYCWDAEELLLVYEFMPKGSLENHLFRRNPNIEPLSWNMRLKIAIGAARGLAFLHTSEKQVIYRDFKASNILLDGNYNAKISDFGLAKLGPSGGESHVTTRVLGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTRRPSGQQNLVEWGKPYLSSKRKLKTVMDARIQGQYSLKAASQAAKLTLKCLQPDPRHRPSMKEVVVELGGIEESKTK 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0026 798 ProSiteProfiles RWP-RK domain profile. 215 300 IPR003035 -
Lele51g0026 798 MobiDBLite consensus disorder prediction 436 458 - -
Lele51g0026 798 MobiDBLite consensus disorder prediction 170 217 - -
Lele51g0026 798 Coils Coil 277 297 - -
Lele51g0026 798 ProSiteProfiles Protein kinase domain profile. 507 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele51g0026 798 Gene3D Phosphorylase Kinase; domain 1 480 592 - -
Lele51g0026 798 Gene3D Transferase(Phosphotransferase) domain 1 593 798 - -
Lele51g0026 798 Pfam RWP-RK domain 233 280 IPR003035 -
Lele51g0026 798 SUPERFAMILY Protein kinase-like (PK-like) 481 788 IPR011009 -
Lele51g0026 798 MobiDBLite consensus disorder prediction 434 458 - -
Lele51g0026 798 FunFam Serine/threonine-protein kinase BIK1 476 592 - -
Lele51g0026 798 FunFam Serine/threonine-protein kinase PBS1 593 798 - -
Lele51g0026 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Lele51g0026 798 MobiDBLite consensus disorder prediction 194 213 - -
Lele51g0026 798 ProSitePatterns Protein kinases ATP-binding region signature. 513 546 IPR017441 GO:0005524
Lele51g0026 798 Pfam Protein tyrosine and serine/threonine kinase 510 789 IPR001245 GO:0004672|GO:0006468
Lele51g0026 798 CDD STKc_IRAK 513 792 - -
Lele51g0026 798 PANTHER OS01G0588500 PROTEIN-RELATED 455 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0026 Lele-ChrLele51 171775 183333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0026 493 790 Glycoside Hydrolase AT3G07070 51.505 1.34e-98 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele51g0026 PK_Tyr_Ser-Thr 5.2e-47 CL0016
TF RWP-RK Lele51g0026 PK_Tyr_Ser-Thr 5.2e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0024 49 159332 169471 Lele51g0026 51 171775 183333 hybridization
Lele50g0028 50 204825 211400 Lele51g0026 51 171775 183333 hybridization