Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0017 ATGGCAGCGATTCGTAGAGAGCCGTATCTCCCAACCATTACCAGCGCAAGCACAGGTGGAACGCCATCCTCCTCTCCGGCTTTGAATTTCTCTGGGAACAGCGTTAAACGCTGCTACATTGTAGAATACATGCCGCCGAAACCTGAGTGCGCTACAAAGTCAAACCCCTACTTGAAACCCGGCTCCGCCGTCGAGTTATGCTCTGACGATGAAGGATTTCGCGGATCTTGGTTTGTTGGCACCATTATTCGCCGCTGTGCTTCCAAGAAAAACCAGAACAAATTCTTGGTGGAGTATAAAACCATCATGGCCGACGAGAAGGGTTCTAAACCCCTGAGAGAGATGCTGGACCTTCACCAGCTTCGACCCGTCGCCCCAAGGGAGCCTGACCGCCAATTCAAGTTCGGCGAGGAGGTCGATGCTTACCAAAATGATGGCTGGTGGGAAGGCTCCATAACCCAAGAATTGGGAAACGGGAGGTTCGCGGTGTATTTCAAGCCCTCAAAGGAGCAGATTGAGTTCGGGAAGGAGGACCTTAGGCTTCATCGCGAGTGGGTCAATGGGAATTGGGTCCCTCCATTGGAAGAACCGTCGGAGGAAAAGAAAAATTTGACAAACGATGTGAAGGCTAGTGAAGAAACAGTGACGGACAGGTTTAGCAAGGGGACCCATGTTGAGGTTAGCAGTGATGAGGAGGGTTTTGAAGGAGCTTGGTTTGCTGCTACTATTGTTGAACCAAAGGGAAAGCATAAGTTTCTTGTTGAGTACCTGAACCTACGGACTGATGATGATTCAGAGTTTTTGAAAGAGGAAGTTGATATCTTACATATTCGGCCTTATCCACCAGAACATGTTTGTGATCAGTTTAAACTTCTTCAAGAAGTTGATGCTTTGTACACTGACGGATGGTGGGTTGGAGTGATTTCTAAAGTTCTTAGCAACTCAAGGTATGTAGTATACTTCAGGGACACTAATGAAGAATTAGAGTTTCCACACTCCGAATTAAGGCTACATCAGGACTGGGTCGAGGGAAAATGGTTCATTGCTTCTAAGGCATTGAAGCTGTAG 1068 0.4766 MAAIRREPYLPTITSASTGGTPSSSPALNFSGNSVKRCYIVEYMPPKPECATKSNPYLKPGSAVELCSDDEGFRGSWFVGTIIRRCASKKNQNKFLVEYKTIMADEKGSKPLREMLDLHQLRPVAPREPDRQFKFGEEVDAYQNDGWWEGSITQELGNGRFAVYFKPSKEQIEFGKEDLRLHREWVNGNWVPPLEEPSEEKKNLTNDVKASEETVTDRFSKGTHVEVSSDEEGFEGAWFAATIVEPKGKHKFLVEYLNLRTDDDSEFLKEEVDILHIRPYPPEHVCDQFKLLQEVDALYTDGWWVGVISKVLSNSRYVVYFRDTNEELEFPHSELRLHQDWVEGKWFIASKALKL 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0017 355 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 211 350 - -
Lele51g0017 355 SMART agenet_At_2 131 187 IPR014002 -
Lele51g0017 355 SMART agenet_At_2 56 129 IPR014002 -
Lele51g0017 355 SMART agenet_At_2 217 285 IPR014002 -
Lele51g0017 355 SMART agenet_At_2 287 343 IPR014002 -
Lele51g0017 355 Pfam Agenet domain 222 282 IPR008395 -
Lele51g0017 355 Pfam Agenet domain 61 126 IPR008395 -
Lele51g0017 355 Pfam Agenet domain 136 194 IPR008395 -
Lele51g0017 355 Gene3D - 209 290 - -
Lele51g0017 355 MobiDBLite consensus disorder prediction 1 28 - -
Lele51g0017 355 MobiDBLite consensus disorder prediction 11 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0017 Lele-ChrLele51 104629 112031 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0017 229 344 PHD Transcription Factor Family AT5G58610 30.657 9.91e-11 61.2