Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0011 ATGGATTCCGCCGTCGAGGGAACGCCTAGGTATTACGGGCTCTGCGCCATTGGAGGAATGCTCAGTGCTGGCACTACCCATCTCGCTACCACTCCTTTTGACGTCCTAAAAGTAAATATGCAGGTGCACCCAATTAAATATTACAGCATTTCCTCGTGCTTTACTACTATATTAAGAGAACAAGGTCCTTCTGCCCTCTGGAGAGGTTGGGCCGGAAAGTTCTTTGGATATGGGGCTCAAGGGGGCTGCAGATTTGGCCTGTATGAATATTTCAAGGGACTTTATTCCAATATAATGGGAGACTGTAATAGGAGTGTGGTTTATTTTGTTAGTAGCGCATCTGCTGAAGTATTTGCCAATATAGCTCTATGCCCTTTTGAAGCTGTTAAAGTGAGAGTGCAGGCACAGCCATGTTTTGCTAAGGGGCTGTTTGATGGCTTTCCAAAGTTGTATGCATCCGAAGGCACACAAGGATTCTACCGTGGGCTTATTCCACTTTGGGGCCGAAACCTTCCATTTTCTGTGGTTATGTTCTCAACATTTGAGCATTCTGTTGATTTATTGTATCGTAAAGTTGTTAAGAAAAGAAAAGAGGATTGCTCAATAACTCAACAGCTCGGGGTGACATGTTTAGCTGGATATGCTGCTGGGTCTGTTGGTAGCTTGATTTCGAACCCAGCAGACAATATTGTAGCTTCTCTTTATAACAGAAAGGCTGATAGTCTTATGCTGGCTATCAGGAAAATTGGTCTAACCAATCTTTTTACGAGGAGCCTTCCTATTAGAATTCTTCTGGTTGGCCCTTCTATAACTATGCAATGGTTGTTTTATGACACAATTAAAGTTATTGGTGGTCTGCCAACTAGTGGTGAAGTCGTGACTGACTCGGAAAGAAACGAGCAGAAGAATGTAATCAGAAACTTTAGCAGCAATGCTCGAGTTGCCAATTTTTCTGTTCGAGTGGCATTTATGGTCTACTGA 981 0.4312 MDSAVEGTPRYYGLCAIGGMLSAGTTHLATTPFDVLKVNMQVHPIKYYSISSCFTTILREQGPSALWRGWAGKFFGYGAQGGCRFGLYEYFKGLYSNIMGDCNRSVVYFVSSASAEVFANIALCPFEAVKVRVQAQPCFAKGLFDGFPKLYASEGTQGFYRGLIPLWGRNLPFSVVMFSTFEHSVDLLYRKVVKKRKEDCSITQQLGVTCLAGYAAGSVGSLISNPADNIVASLYNRKADSLMLAIRKIGLTNLFTRSLPIRILLVGPSITMQWLFYDTIKVIGGLPTSGEVVTDSERNEQKNVIRNFSSNARVANFSVRVAFMVY 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0011 326 Gene3D Mitochondrial carrier domain 15 282 IPR023395 -
Lele51g0011 326 SUPERFAMILY Mitochondrial carrier 13 279 IPR023395 -
Lele51g0011 326 FunFam Mitochondrial phosphate carrier protein 1, mitochondrial 13 284 - -
Lele51g0011 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 204 283 IPR018108 -
Lele51g0011 326 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 7 292 IPR044677 GO:0005315|GO:1990547
Lele51g0011 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 94 IPR018108 -
Lele51g0011 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 187 IPR018108 -
Lele51g0011 326 Pfam Mitochondrial carrier protein 106 191 IPR018108 -
Lele51g0011 326 Pfam Mitochondrial carrier protein 16 96 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0011 Lele-ChrLele51 74819 79038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0011 8 292 Chloroplast and Mitochondria Gene Families AT2G17270 67.719 1.17e-152 429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0011 51 74819 79038 Lele51g0011 51 74819 79038 ECH
Lele49g0008 49 70200 74713 Lele51g0011 51 74819 79038 hybridization
Lele50g0011 50 111973 114671 Lele51g0011 51 74819 79038 hybridization