Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1776 ATGGCCTCTACTATGGCCATGGTTTTGAAGTCAATGGCCGCGACAACCGGCGATCTATGTCTCTTTAGTCACTTTGCTGTGAATGAAAACCCGAAAGTCCATTTCAGAACTCGGGATTTTGGTGCCAGAGCTGTAAATCGAGGGTTTTGTACTTATAGAAAGACATTGAAGAGAAGGCTGGGGATCAAGGTACGTGCGGTTGTGCAAGAGAATCTTGAGGCATCAAAGAGGAGTAATGCTTATCCTCTTGGGCTGGACGTGGTTTCAGAAGGGGAGTTAAGGGAGAAGGGGTTTATGGGGTTGAGGAAGACGAAGTTAGTATGCACAATTGGGCCCGTATGTTGGGCATTGGAGGATTTAGAGAAGTTGGCTTTGGGAGGAATGAATGTTGCTAGGCTCAACATGTGCCATGGGACCAGGGAGTGGCACTTGGATGTCCTTAAGAAGATCAAGAAGTTAAATCGGGAAAGAAATTTTTCTATCTCTGTGATGATAGATACTGAGGGTAGTCAAATTCATGTTGTTGATCATGGGGCTCCTTCCTCTGTTAAAGTAGAGGATGGTTCGATTTGGCTTTTTACTGCTGAACAGTCCAAGAGTTACCGTCCATTCACCGTTCAAGCAAACTTTGAAGGTTTTTCCGAAGGTATTGAAGTGGGTGATGAACTTGTTATTGATGGTGGAATGGCATGCTTTGTAGTTGTTGAAAAGACTGAATGTGATTTGTGTTGTAAGTGCACAGATCCTGGTCTTTTCCTACCTGGAGCCAAATTTAGCTTCTGGAGAAATGGAAAGCTCGTGAGGAGGAGTCATAAGCTCTCAACTCTATCAACAAAGGATTGGGCTGACATTGATTTTGGAATCTCTGCGGAAGTTGATTATTTTGCCCTGTCCTTTGTCAATGACGCGGATTCTATCAAGCATTTAAAGAAATACCTGTCTACTAAAACTGCCAAACCTATTAAGGTATTAGCAAAGATAGAGAGCCTGGAATCCCTTTATAACCTAGAGGATATAGTGCAAGCTTCTGATGGAATCATGGTGGCTCGGGGCGACCTTGGGGTGGAGACACCACTTGAACAGATTCCTATAGTCCAAGAGAGTATAACTTACATTAGCAGACAACTTAACAAGCCAGTAATTGTAGCTTCTCAACTTCTTGAGTCAATGGTTGAATATCCAACTCCAACACGGGCTGAGGTTGCAGATGTTTCTGAAGCAGTTAGACAGTATGCTGATGCCTTGATGTTATCCGGTGAGTCAGCTATTGGTTCATATGGACAGAAGGCTCTAGCAGTTCTTGATACGGCTAGCAGCAGAATGGAATCATGGAGTCGGGCAGAGAACAGACAGACTCATATCAATACCCATCTTGGGCTATCATTACCAGACCGTATCGCAGAGCAGATATGCAATTGTGCGGTTGAGATGTCCAACAACCTTGGCGTGGACGCTATTTTTGTGTTCACAAAGCATGGATACATGGCATCTCTCTTATCACGGAACCGTCCAAATCCTCCTATCTTTGCTTTCACCAGCGATCACAATACCCGTATGGCTCTGAATGTGCAATGGGGAGTTGTTCCTCTCCTTGTTGATTTATCAGATGATGCAGAATCTAACATCTCAAAATCCGTTGGGCTCATGAAATCCAGAGGATTGCTCAGGCAAGGAGATATTGTTCTTGTGGTCTCCGATTTTACTCCAACACCTACAACTCCATTGTCTCTCCAGTCAATTCAAGTGAAGTGTGCATCACCATTTTGCTTCCCAGTAAACTCAAAAGGCCAGAAAACAAAGGTACGGTTAATTTTGCTCTTTATTTTCTTTAACTGCGAACCTTTCAGGATGGAGCAGATCATTGAAAGATACCAGAAAGCTATGGGAGTACGCATACCTGAACATGATAGTCGGAAAGATTTGTTCAGTGATATGGCAATGCTGAGGCAGGAGACTCTGCGTCTGGAACTGGGAATTCAAAGGTACATTGGGGACAGCATGGGAACTCTACAGTACGAGGAACTGACAAAACTGGAACATGACCTGGAGATATCCGTCACCAAGGTCCGAAATCGCAAGAATGATCTGTTGCAACAGCAGCTGGATAATCTGCGAAGAGAGGAAAGAATGATGGAAGAAGAGAACAGCTATCTGGCGCATTGGACTGAGGAGCAGCGAGGAGTGATATCAATGGAGAATCATGATAATGAGCAAATGGATCAGTTGCCATTCTACGACGGCCAAACGTCTCTCCACTTTCATCCCTATCTCCAGCTTGCCCAGCCCAACATTCATCCCCACTGA 2304 0.4449 MASTMAMVLKSMAATTGDLCLFSHFAVNENPKVHFRTRDFGARAVNRGFCTYRKTLKRRLGIKVRAVVQENLEASKRSNAYPLGLDVVSEGELREKGFMGLRKTKLVCTIGPVCWALEDLEKLALGGMNVARLNMCHGTREWHLDVLKKIKKLNRERNFSISVMIDTEGSQIHVVDHGAPSSVKVEDGSIWLFTAEQSKSYRPFTVQANFEGFSEGIEVGDELVIDGGMACFVVVEKTECDLCCKCTDPGLFLPGAKFSFWRNGKLVRRSHKLSTLSTKDWADIDFGISAEVDYFALSFVNDADSIKHLKKYLSTKTAKPIKVLAKIESLESLYNLEDIVQASDGIMVARGDLGVETPLEQIPIVQESITYISRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGSYGQKALAVLDTASSRMESWSRAENRQTHINTHLGLSLPDRIAEQICNCAVEMSNNLGVDAIFVFTKHGYMASLLSRNRPNPPIFAFTSDHNTRMALNVQWGVVPLLVDLSDDAESNISKSVGLMKSRGLLRQGDIVLVVSDFTPTPTTPLSLQSIQVKCASPFCFPVNSKGQKTKVRLILLFIFFNCEPFRMEQIIERYQKAMGVRIPEHDSRKDLFSDMAMLRQETLRLELGIQRYIGDSMGTLQYEELTKLEHDLEISVTKVRNRKNDLLQQQLDNLRREERMMEEENSYLAHWTEEQRGVISMENHDNEQMDQLPFYDGQTSLHFHPYLQLAQPNIHPH 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1776 767 SUPERFAMILY PK C-terminal domain-like 462 569 IPR036918 -
Lele50g1776 767 TIGRFAM pyruv_kin: pyruvate kinase 102 569 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele50g1776 767 FunFam Pyruvate kinase 275 441 - -
Lele50g1776 767 PANTHER PYRUVATE KINASE 86 566 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele50g1776 767 ProSiteProfiles K-box domain profile. 638 728 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele50g1776 767 Pfam Pyruvate kinase, alpha/beta domain 468 565 IPR015795 -
Lele50g1776 767 Gene3D - 442 567 IPR036918 -
Lele50g1776 767 Pfam K-box region 634 720 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele50g1776 767 Gene3D - 102 441 IPR040442 -
Lele50g1776 767 Pfam Pyruvate kinase, barrel domain 102 443 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele50g1776 767 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 96 444 IPR015813 GO:0003824
Lele50g1776 767 Coils Coil 687 714 - -
Lele50g1776 767 ProSitePatterns Pyruvate kinase active site signature. 321 333 IPR018209 GO:0004743|GO:0006096
Lele50g1776 767 Gene3D - 170 274 IPR015806 GO:0004743|GO:0006096
Lele50g1776 767 SUPERFAMILY PK beta-barrel domain-like 172 255 IPR011037 -
Lele50g1776 767 PRINTS Pyruvate kinase family signature 323 349 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele50g1776 767 PRINTS Pyruvate kinase family signature 375 399 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele50g1776 767 PRINTS Pyruvate kinase family signature 159 175 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele50g1776 767 PRINTS Pyruvate kinase family signature 400 418 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele50g1776 767 PRINTS Pyruvate kinase family signature 350 374 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele50g1776 767 PRINTS Pyruvate kinase family signature 292 306 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lele50g1776 767 PRINTS Pyruvate kinase family signature 419 435 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1776 Lele-ChrLele50 22422464 22431305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1776 610 732 MADS-box Gene Family AT5G23260 42.742 6.00e-24 100