Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1770 ATGATTTTACAATCTGCTTCTGCTAGCTTTGACTTCTCGCAGATATTTCCTTACGTTTGCCCATGTAGTAACTTGGGTGCGATTAATGGTTCAAGGAGCCAGAGTTTTCTAACGGTTCCTATGTCTAGAAGAAGGAGGAAAGGATTGATTGCCAATTCAGGGTATCGAAAATTTCGAAGGAAATGGGGATTTCGCTTGTGCGCAATGCCTACGGATGGTTCTAACCGAAACGGAAACTGGAATGCAGAATTCGCTGATTCTACAAGACTGGTTGCAAAAACTTTCGTCTTGAAACGAATTTCTAATGAATTGGAGGGGGATGAATTGTCGCAAGAATCGCCAATTCAGTTGAGCTCGAACTTTACCAATTTCCAAGAAGACCCTATTGTAGATAAGCTAAGAACCCAACTGGGAGTGATGCATCCGATACCATCGCCACCAATTAACCGCAACGTGGTTGGTTTGTTTGTATTCTTTTTCTTTGTCGGGGTTGCTTTTGATAAACTGTGGACCTCAAGGAGGAGAAGCAAAGTCGGTAGCGTAGACACCCGTCGTGGTGTGTGGCCACAGGTGCCCACCAGCTTTTCATTGTTTCTAGAGAAGGATTTACAGAGAAAAGAGTCAGTTGAATGGGTGAACATGGTGTTGGTGAAGTTATGGAAGGTCTACAGAGCTGGGATTGAAAATTGGATCATCGGATTGCTTCAGCCTGTTATCGACAACTTAAAGAAGCCTGATTATGTGGAAAGGGTTGAGATAAAGCAATTCTCTCTGGGGGATGAGCCATTGTCAGTTAGAAATGTGGAGCGAAGGACTTCTCGCCGGGCAAATGATTTGCAGTACCAAATAGGCCTTAGGTATACTGGTGGCGCTCGCATGCTGCTGATGCTTTCACTAAAATTTGGCATTATCCCAATTGTTGTGCCCGTTGGTGTTCGAGATTTTGACATTGATGGTGAACTATGGGTAAAATTGCGACTAATCCCAACGGAGCCATGGGTGGGAGCTGTTTCATGGGCTTTTGTTTCACTTCCAAAGATCAAGTTTGAATTGTCACCATTCCGTTTATTCAATTTAATGGCAATTCCAGTTCTCTCAATGTTTTTGACAAAACTCCTCACTGAAGATTTACCTCGGTTATTTGTACGTCCAAAGAACATCGTTTTGGATTTCCAGAAGGGAAAAGCTGTTGGTCCTGTTGCTGGTGATTTAAAATCTGGTGAATTGCAAGATGGAAACAAGGATTTTGTTGGTGAACTATCCGTCACTCTTGTCGATGCTAGAAAGCTTTCTTATTTTTTCTACGGAAAGACAGATCCGTATGTTATTCTTACCCTTGGAGATCAAACTATTCGCAGCAAAAAGAACAGTCAAACTACTGTGTTTGGTCCCCCTGGTATGCCAATTTGGAACCAGGATTTTCATATGCTGGTCACTAACCCTAAAAAGCAGAAGTTACACATCCAAGTAAAGGATTCTTTGGGATTTATGGATTTGACTACAGGAACTGGGGAGATTGATCTGGGATCTCTCCAAGACACTGTACCAACAGACCGGGTTGTGGTTTTGCAAGGAGGTTGGGGGATTTTGGGAAAGGGCTCTTCTGGGGAGATATTGCTACGACTAACTTATAAAGCATATGTGGAGGATGAAGAAGACGACAAGACCAACTCCATTGATACAGATGCTTCAGATGATGAGTTGTCAGATTCAGAGGAATCAAGTGGTACTAATGAGAAGGGTGAAAGAGATGCTATGAGTGAAAGAGAGTCATTTATGGATGTCTTGGCAGCATTAATTGTTAGTGAAGAATTCCAAGGTATAGTAGCATCTGAAACAGGGCATGCCAAAACTTCAGATGACAGCTTAAGTATAGGGTCTAATGTTCCAACGTCTAATCTTAATGTGGAATCAAACCCTTCAAATTCTGATAGTTCTGAAGGTTCTACAGGGTCAGCCTTATTCTGGTTTGCTGTGATTACTAGCATATCAATTCTAATTGCTCTCAATATTGGAGGTTCAAGTATTTTCAATCCTTAA 2040 0.4206 MILQSASASFDFSQIFPYVCPCSNLGAINGSRSQSFLTVPMSRRRRKGLIANSGYRKFRRKWGFRLCAMPTDGSNRNGNWNAEFADSTRLVAKTFVLKRISNELEGDELSQESPIQLSSNFTNFQEDPIVDKLRTQLGVMHPIPSPPINRNVVGLFVFFFFVGVAFDKLWTSRRRSKVGSVDTRRGVWPQVPTSFSLFLEKDLQRKESVEWVNMVLVKLWKVYRAGIENWIIGLLQPVIDNLKKPDYVERVEIKQFSLGDEPLSVRNVERRTSRRANDLQYQIGLRYTGGARMLLMLSLKFGIIPIVVPVGVRDFDIDGELWVKLRLIPTEPWVGAVSWAFVSLPKIKFELSPFRLFNLMAIPVLSMFLTKLLTEDLPRLFVRPKNIVLDFQKGKAVGPVAGDLKSGELQDGNKDFVGELSVTLVDARKLSYFFYGKTDPYVILTLGDQTIRSKKNSQTTVFGPPGMPIWNQDFHMLVTNPKKQKLHIQVKDSLGFMDLTTGTGEIDLGSLQDTVPTDRVVVLQGGWGILGKGSSGEILLRLTYKAYVEDEEDDKTNSIDTDASDDELSDSEESSGTNEKGERDAMSERESFMDVLAALIVSEEFQGIVASETGHAKTSDDSLSIGSNVPTSNLNVESNPSNSDSSEGSTGSALFWFAVITSISILIALNIGGSSIFNP 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1770 679 MobiDBLite consensus disorder prediction 551 587 - -
Lele50g1770 679 MobiDBLite consensus disorder prediction 553 572 - -
Lele50g1770 679 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 205 392 IPR031468 GO:0008289
Lele50g1770 679 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 52 679 - -
Lele50g1770 679 MobiDBLite consensus disorder prediction 573 587 - -
Lele50g1770 679 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 418 546 IPR035892 -
Lele50g1770 679 ProSiteProfiles C2 domain profile. 405 521 IPR000008 -
Lele50g1770 679 Pfam C2 domain 418 514 IPR000008 -
Lele50g1770 679 Gene3D C2 domain 406 547 IPR035892 -
Lele50g1770 679 SMART C2_3c 419 520 IPR000008 -
Lele50g1770 679 MobiDBLite consensus disorder prediction 612 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1770 Lele-ChrLele50 22377963 22385495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1770 409 511 C2H2 Transcription Factor Family AT4G05330 33.654 4.21e-06 47.4