Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1764 ATGTTAATTTTCAATCAGCGTGACGTTACAAGCATCGCTTATTCCATTACACGGAACCTTAAACCTACGAATTTAAATCGCAGGCTCTGTCAACTGGTGGTTCCCTCCCCTTTCTCTGTCATTCATCACCCGCAGAAGACAAGTTTAAAGCTGCTGGGAGATGAGATTGGAAAAGGAGCATATGGACGGGTTTACAAAGGTTTGGACTTGGAGAATGGAGACTTTGTTGCAATTAAACAAGTTTCCTTGGAGAATATTCCTCAGGAGGATCTCAACATCATCATGCAAGAGATTGATTTGTTGAAGATTTTGAATCATAAGAACATTGTAAAATATCTCGGATCTTCAAAGACAAAGACTCACCTGCACATAATTCTTGAGTATGTGGAGAATGGCTCACTTGCGAATATTATCAAGCCAAATAAATTTGGACCTTTTCCAGAATCATTGGTTGCTGTTTATATTTCCCAGGTATTAGAAGGCTTGGTTTATCTACATGAACAAGGGGTAATCCATCGAGATATTAAAGGTGCAAACATATTGACAACTAAAGAGGGTCTCGTTAAACTTGCTGATTTTGGTGTAGCAACAAAATTGACTGAGGCTGATGTCAATACTCATTCCGTTGTTGGAACACCATATTGGATGGCCCCAGAGGTTATAGAAATGTCTGGGGTTTGTGCTGCCTCTGACATTTGGAGTGTTGGCTGTACGGTTATTGAACTTCTTACATGCGTGCCCCCTTATTTTGATCTGCAGCCTATGCCAGCTCTCTTTCGTATTGTTCAGGATGAAAATCCTCCACTTCCAGATAGCTTGTCTCCTGACATCACTGATTTTTTGTGCCAATGCTTTAAGAAGGATGCTAGACAAAGGCCAGATGCTAAAACTTTGCTCGCTCATCCTTGGATAAAAAACAGTAGACGTGCTCTGCAGTCATCACTTCGTCAAAGCAGAACACCAAAAAATAGAGTGGAAGATGATTCAGTGGCTGCAGAGGCTATGAAGATGTCAGAACTTAGGGAGGGAAATGAGCTGAGTAGATTTAGTGACCCTCCTGGAGATGCCTCCTTAGATGATCTGTTTCACCCTGGGGAGTTGGCAGCTGAAGCTTCCATGTCAAACGCTGGGAAAGCTATTCTACCTATGAATAATACTGGGAGGAATGACCTGGCTCAAGAGTTGAGAGACACAATTGCTCGGAAACAGGGGGAAAAGGAGAGTGAAATTGGACACGTCAACAATGGAGGCAACCTTTGGCGGCTAATGATGGGAGTTCTAAAAGATGATGTCATTGATATAGATGTACCTGATCGTCCTCGAGAGATTCGTATGGAAGCAGCTTATTTCTTGCAGCAGCTTTGTCAATCGAGCTATTTGACATTGCAAATGTTCATAGCTTGCCGTGGAATACCAGTTTTGGTGGGATTTCTGGAGGCTGACTATGCCGAGTATAGGTTAGTTGTTTGTGCTTTGTACAGTAACAGAGGAATGTGA 1497 0.4235 MLIFNQRDVTSIAYSITRNLKPTNLNRRLCQLVVPSPFSVIHHPQKTSLKLLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIPQEDLNIIMQEIDLLKILNHKNIVKYLGSSKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYISQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYFDLQPMPALFRIVQDENPPLPDSLSPDITDFLCQCFKKDARQRPDAKTLLAHPWIKNSRRALQSSLRQSRTPKNRVEDDSVAAEAMKMSELREGNELSRFSDPPGDASLDDLFHPGELAAEASMSNAGKAILPMNNTGRNDLAQELRDTIARKQGEKESEIGHVNNGGNLWRLMMGVLKDDVIDIDVPDRPREIRMEAAYFLQQLCQSSYLTLQMFIACRGIPVLVGFLEADYAEYRLVVCALYSNRGM 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1764 498 Pfam Protein kinase domain 54 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g1764 498 ProSiteProfiles Protein kinase domain profile. 50 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g1764 498 Gene3D Transferase(Phosphotransferase) domain 1 51 341 - -
Lele50g1764 498 FunFam MAP3K epsilon protein kinase 1 47 336 - -
Lele50g1764 498 MobiDBLite consensus disorder prediction 310 329 - -
Lele50g1764 498 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
Lele50g1764 498 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 43 319 - -
Lele50g1764 498 PRINTS Tyrosine kinase catalytic domain signature 230 252 IPR001245 GO:0004672|GO:0006468
Lele50g1764 498 PRINTS Tyrosine kinase catalytic domain signature 126 139 IPR001245 GO:0004672|GO:0006468
Lele50g1764 498 PRINTS Tyrosine kinase catalytic domain signature 164 182 IPR001245 GO:0004672|GO:0006468
Lele50g1764 498 PRINTS Tyrosine kinase catalytic domain signature 273 295 IPR001245 GO:0004672|GO:0006468
Lele50g1764 498 SMART serkin_6 50 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g1764 498 SUPERFAMILY Protein kinase-like (PK-like) 36 333 IPR011009 -
Lele50g1764 498 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Lele50g1764 498 CDD STKc_Cdc7_like 52 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1764 Lele-ChrLele50 22306727 22315252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1764 438 489 MAP Kinase Kinase Kinase AT3G13530 88.462 2.13e-22 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Lele50g1764 Pkinase 1.8e-71 CL0016