Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1760 ATGACGAGGGAGGAAGAGAAGGACGACGGTGGCAGAGCAGCTACTCTGACCGAGAGAGAGAGAGAGAGAGAGACAAAGATCCAGAGAAAATCAATGGGGAGTTGTGGAAGGGAAGGATCGGTGAGGCAGTATATACGATCCAAAGTCCCTCGTCTAAGATGGACTCCTGAACTCCATCGCTGCTTTGTTCATGCCATTGACTCCCTGGGAGGTCATCACAAGGCGACGCCTAAGCTTGTTCTTCAGATGATGGCTGTCAAAGGTCTTACTATTTCACACGTGAAGAGCCATCTCCAGATGTACAGAAGTATGAGAAGCAATTTGGGTAGACAAGATGGGAGTTCGAGCCACCATAGAAAACAATCTTTTGAGGAACATGATGATGGGTGTGTTGATGAATTGAATGGTGCGGATGCTGGTAGAGGTAGCATTATTCAACAATGCTCAAAATCCATGAGGAAAGAATCAGATTCCCCCATTAGCTATAGTGATTTCTCACCCAAAAGAGCGAGAATGGAGACGAGGAGTTGCATAGCAGGAGCAGAGAGGCAAAGAACGTGTAAAGCAGGAACGGTGACGAATCCGTACAGCTTTTATGATTATGTGCAGATAATGGGTGAGCGCAAGGGAATAAAGGAGGCTTCTTCTTCCTCTTCTGCTGCGGCAAAAATATCAATATGGCAGAATCATCCCTTCTCTCTTCTACCACATTTTCCTAACCTCACTTCTTTTAACCAACAATCCAATTTTCTTCAGGGTCGCGAATTAGTGAGCAGAAGAAACGTGGGTTCAGTGGCGAAGAATAAAGGAGGAGATGAAGGAGGGAGAGAGTGTGAGCTGTCACTATCTCTGTCACTGCCAAATCAGTCATCAAAGAGGAGCAATACAATTACGAACAACAATTCATCAAGCAGTGAAGTGAGCGAAGCCATGTCATTCATATCTTGTTCTGCCTCCGGCAAAGATACTATTAACTTAGACTTGTCTATAGCCCTTTGTGGCAATTGA 1008 0.4524 MTREEEKDDGGRAATLTERERERETKIQRKSMGSCGREGSVRQYIRSKVPRLRWTPELHRCFVHAIDSLGGHHKATPKLVLQMMAVKGLTISHVKSHLQMYRSMRSNLGRQDGSSSHHRKQSFEEHDDGCVDELNGADAGRGSIIQQCSKSMRKESDSPISYSDFSPKRARMETRSCIAGAERQRTCKAGTVTNPYSFYDYVQIMGERKGIKEASSSSSAAAKISIWQNHPFSLLPHFPNLTSFNQQSNFLQGRELVSRRNVGSVAKNKGGDEGGRECELSLSLSLPNQSSKRSNTITNNNSSSSEVSEAMSFISCSASGKDTINLDLSIALCGN 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1760 335 MobiDBLite consensus disorder prediction 1 40 - -
Lele50g1760 335 FunFam Myb family transcription factor 48 106 - -
Lele50g1760 335 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 30 146 - -
Lele50g1760 335 MobiDBLite consensus disorder prediction 107 137 - -
Lele50g1760 335 MobiDBLite consensus disorder prediction 112 134 - -
Lele50g1760 335 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 50 103 IPR006447 GO:0003677
Lele50g1760 335 SUPERFAMILY Homeodomain-like 48 105 IPR009057 -
Lele50g1760 335 Gene3D - 49 106 - -
Lele50g1760 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 106 IPR017930 -
Lele50g1760 335 MobiDBLite consensus disorder prediction 1 31 - -
Lele50g1760 335 Pfam Myb-like DNA-binding domain 52 102 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1760 Lele-ChrLele50 22286576 22290594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1760 32 108 G2-like Transcription Factor Family AT1G14600 71.951 1.46e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele50g1760 Myb_DNA-binding 6.2e-06 CL0123