Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1749 ATGTGCAAGGGGTCAGCGTTTCATTGGAAGAAGAAGCTGGCGGTTCACGGTGCCGGACGAAAAGTAGCGGAGGCAGAAAATGGAGTGACGGAGGATATTCTTGGGAGCCCACCTGCCTGTGTTCGTAGGATGGAGCTTCCTGCGTTTACCAGGTTCGAGGCAATTTCTAAGGTTTCATTATTCCCATTTTCTTCCAAACAAGTTTTGTTTGGAAACACTGTTCGTTGCCGGAACATTAGGTTCCTATGGTGTCGAAATTCAAAATCTTTTGCTGGAATCACCATGACTTCAGACGAAGATTCCTTGTCAAATGATTGTGGACTAAGACAGAGCCTTGGAACTAGATCTGGATTTATTGACGTGATTGGCATTGGCAGCAGGAAGGATGCAGTTCTAGATTTCTGCTTAAAGTCGCCATTTCAGTTATCGTCGCTGCGATTCTGGAATATTCTTATGAAGGAATCTCAAGAGGTTCAATTGCAACTAAGGTCTTATGAAGAAGATTCTCTTCCAAGAATTGTCAAAGCTCCATTATTTATGAAGTCATGCTCAACTACTATTATTCTTGTAGCTAGCGCAGGATATGGATCAGACCACTCTGTTGCAGTTGATGTTTTCAAAACAATAAAGTCATCAAATGGATTAACTGTTGCTATTATCTTGAAGCCTTTTGTCTTTGAAGGGTTGAGGCGACGGGATGAGGTCAAAAATTTGGTAGAGAAACTAAAGGAGAACACAGATTTACTTATTGAAATTGATATCGATTCACTACTTAAAAAAGACTTGGTGACTCTAGATGAAGCTATGAAAACTGCAAATGATGCAGTTTTGTTGGCCATTAATGCCATATCCATTCTCAAATCAGAGATGCACAGGAAACTTATAGATGGTTTGCATGGCTGTGGCACAAAAGAAGTCAGTAATTTGGAAATTAATAAAATATTTGAAAGCTATAAGGAAGCTAGAATTGGATTTGGAGCAGCATATAACATGAAAACTTCAATTCTACAGTCTTTAATTGATTGTCCTTTCCTTGGTGTTAGTTTGAAGGACTCAAATAGCATGGTTATATGCAATCTCACAAGTTCAGTTCCTATCAATGAGAATGATATCACCGCATTTCTGCATACTTTCCGTCAAACAACAGGATACACAAAGGAAATAATAATATCTACAGACCATGAGCCTAATCTTGAGCCAAACCTCCTAATCACCACTGTTCTTGCACTGGGGATAAATATGCAACAATCTTCCCAGAGTGGTGGCATGCTTTATAGACTTGCGCAGCATTTTCCTCTTATTTTCAGCTTTTGGGGGAAACATCAACATCAACCAGCTGACACCAGGAAAGAGAATTCAACTGAAAGTATATCTCCTTCTCAAGAGGCTGTATCAGATGAATTTAAAGATGGGGGTAGAAATGCTTCTGATGTGATAGAGGACAAGTTCAATAAGGATTTTGAATCTTTGGAGCCACTTGTGAGCAATAAAACTACAAAGTCAAACGAATCGAGGTGTTCTGAACAAAACAGAGAAGAACAATTGGACACAAGTTCTGAGTTTTCCAGCCTTGATGATGAAATTTCTAGAGGCGACTCTGCTTGTCGAAGGGAGAAACTCTTAAATTGGAATCTTGGTCCTGGGCATGAGGTTGCACGGGAGTGGGCCAAACAAAGGGCAGCTGACGCTACTACTTCAACAGCGGACAATGTTAGCATCTTTAACCTTCCTGTTGGTGTCAGATATTCTGAACAGTTAAAAGAGCGTTCAAAAGTCTCCATGGCTCAAGAGCCGGCAACTGAAAATGATGTCAAAGTACCTAATAAGATGCCTTGGAGTGCATTGACTGATGCAGGTCGGGAAGCAGTGATGGATTTTACATCTACGCTTTTAAATGGAAAGCATGCAGACAAATCAAACAAGCAAGGGTTTCTTTCTGCTCGAGCGGCATCCATGCTGGAAGCAGAACGTGATTCATCAAAGAAATGGATCCCAATTGTGGAAATGCAATATAGAGGAGGTCAATACAAGGGACGATGCCAAGGAGGTCTACCGGAAGGGAAGGGGCGACTTGCCCTTGGGGATGGAAGTATATACGACGGTACATGGCGCTATGGTAAGAGATCAGGTCCCGGCACATTGTATTTCATCAACGGCGATGTGTTCCAAGGATCATGGAGGGACGATCTTATGCATGGGAAAGGCTGGTTTTATTTTCACACAGGGGATAGGTGGTTTGCAAACTTTTGGAAGGGAAAGGCAAATGGTGAAGGGCGTTTCTACACAAAGAATGGGGATGCCTTCTTTGGCAATTTTAAAGATGGATGGCGACACGGGCAATTTCTATGCATTAAAGCCGAAGGAACAAGGTACATTGAGATTTGGGAATATGGCGTTATTGTAGAAAGCAAGCATTTAGACGAAGACGATGGAGAAGAATGA 2442 0.4165 MCKGSAFHWKKKLAVHGAGRKVAEAENGVTEDILGSPPACVRRMELPAFTRFEAISKVSLFPFSSKQVLFGNTVRCRNIRFLWCRNSKSFAGITMTSDEDSLSNDCGLRQSLGTRSGFIDVIGIGSRKDAVLDFCLKSPFQLSSLRFWNILMKESQEVQLQLRSYEEDSLPRIVKAPLFMKSCSTTIILVASAGYGSDHSVAVDVFKTIKSSNGLTVAIILKPFVFEGLRRRDEVKNLVEKLKENTDLLIEIDIDSLLKKDLVTLDEAMKTANDAVLLAINAISILKSEMHRKLIDGLHGCGTKEVSNLEINKIFESYKEARIGFGAAYNMKTSILQSLIDCPFLGVSLKDSNSMVICNLTSSVPINENDITAFLHTFRQTTGYTKEIIISTDHEPNLEPNLLITTVLALGINMQQSSQSGGMLYRLAQHFPLIFSFWGKHQHQPADTRKENSTESISPSQEAVSDEFKDGGRNASDVIEDKFNKDFESLEPLVSNKTTKSNESRCSEQNREEQLDTSSEFSSLDDEISRGDSACRREKLLNWNLGPGHEVAREWAKQRAADATTSTADNVSIFNLPVGVRYSEQLKERSKVSMAQEPATENDVKVPNKMPWSALTDAGREAVMDFTSTLLNGKHADKSNKQGFLSARAASMLEAERDSSKKWIPIVEMQYRGGQYKGRCQGGLPEGKGRLALGDGSIYDGTWRYGKRSGPGTLYFINGDVFQGSWRDDLMHGKGWFYFHTGDRWFANFWKGKANGEGRFYTKNGDAFFGNFKDGWRHGQFLCIKAEGTRYIEIWEYGVIVESKHLDEDDGEE 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1749 813 Pfam MORN repeat 749 766 IPR003409 -
Lele50g1749 813 Pfam MORN repeat 699 721 IPR003409 -
Lele50g1749 813 Pfam MORN repeat 681 697 IPR003409 -
Lele50g1749 813 Pfam MORN repeat 722 744 IPR003409 -
Lele50g1749 813 Gene3D - 674 728 - -
Lele50g1749 813 Gene3D - 729 776 - -
Lele50g1749 813 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 143 809 - -
Lele50g1749 813 SUPERFAMILY Tubulin nucleotide-binding domain-like 121 285 IPR036525 -
Lele50g1749 813 MobiDBLite consensus disorder prediction 494 528 - -
Lele50g1749 813 SMART morn 720 741 IPR003409 -
Lele50g1749 813 SMART morn 697 718 IPR003409 -
Lele50g1749 813 SMART morn 766 787 IPR003409 -
Lele50g1749 813 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 673 800 - -
Lele50g1749 813 MobiDBLite consensus disorder prediction 445 475 - -
Lele50g1749 813 Gene3D Tubulin/FtsZ, GTPase domain 154 413 IPR036525 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1749 Lele-ChrLele50 22206589 22214088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1749 44 810 PP2C-type Phosphatase Gene Family AT1G75010 44.948 0.0 617