Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1740 ATGGCGGCAGTGACAGAAATGTTGCTTCCGTACAGAATAATGGCCGAAGAAGCTTCTACTTCGGCTTCTTCTTCGGAAGTTGAGTCTAATCCAACTGATGCAGTAATATTCGTAGGAGTCAGCCTGGCTCTGGGAATTGCTAGTAGGCATATTTTGCGTGGGACCAGAGTCCCTTATACTGTTGCTCTTCTCACCATTGGCATTGGTCTTGGATCATTAGAATATGGTACTCATCATCAGCTGGGAAAGATTGGCAATGGAATTCGTATTTGGTCAAACATTGATCCAGATCTTCTGTTAGCTGTTTTCCTTCCTGCCCTCCTTTTTGAGAGCTCATTCTCAATGGAAATTCACCAAATTAAGAGGTGTATTGTACAAATGATATTACTAGCTGGTCCAGGAGTTGTGATATCAACCTTCTGTCTTGGATCTGTTTTGAAGTTGACTTTTCCGTATAACTGGAGTTGGAAAATATCACTATTGCTTGGGGGACTTCTAAGTGCAACTGATCCTGTAGCAGTTGTGGCTTTGTTGAAAGAGCTTGGTGCCAGCAAAAAATTGAGTACAATAATTGAAGGGGAATCCTTGATGAATGACGGGACGGCAATTGTGGTCTATACTCTATTTTTTCGGATGGTCCTTGGAGAGAGCTTCAACTGGGCGTCCATAATCAAATTTCTAGCACAAGTTTCACTTGGAGCTGTAGGTATGGGTCTTGCTTTTGGGATAGCATCTGTTTTGTGGCTTGGATTTATTTTTAATGATACAGTGATAGAGATCACTCTAACACTGGCTGTTAGCTATATTGCTTTCTACACTGCTCAAGAGGGTTCTGATCTTTCTGGTGTTTTGACGGTGATGACACTGGGGATGTTTTACTCTGCCTACGCGAGGACCGCTTTTAAGGGTGATGGACAACAAAGTTTGCATCACTTTTGGGAAATGGTTTCTTATATCGCTAATACATTAATTTTCATATTGAGTGGAGTTCTTATAGCTGAAGGCATCCTTAATGGTTACAATGTGTTTGCTGATGGAAAATCATGGGCCAACCTCTTTCTTCTCTATGCTTATGTTCAAGCATCTAGGTGCATAGTCGTTGGGATACTTTTTCCCTTCCTACGTTACTTTGGATATGGTTTGGATTGGAAAGAAGCTGTAATTCTCATCTGGTCAGGATTGCGAGGGGCAGTTGCCTTGTCATTATCATTGTCAGTTAAGCGTTCCAGTGGCAGATCAGTTGAATTGAATTCAGACACAGGAACACTGTTTCTATTCTTCACTGGTGGAATTGTGTTCTTGACTCTTATTGTGAATGGTTCGACCACACAGTTTATTTTACACTTCCTTGACATGGATAGATTATCTGCAGCTAAGAAACGCATCCTTAATTATACAAAGTATGAAATGTTGAACAAAGCATTAGAGGCTTTTGGCGAGCTTGGAGATGATGAGGAACTGGGACCTGCTGACTGGCCTACTGTGAAGAGATATATCTCATGCTTAAATGACCTTGAAGGTGAACGCATTCATCCTCATGGTGCACCTGAAAGTGACAGTACTCTGGATCCCATGAATTTGAAAGACATAAGAATACGCCTTTTGAATGGTGTCCAAGCTGCTTACTGGGAGATGCTTGATGAGGGAAGAATTGCGCAAGCAACAGCTAATATCTTAATGAGGTCAGTGGAGGAAGCTATAGATTTGGCTCCACTTGAGCCTTTATGCGACTGGAGAGGCTTAAAACCTAACGTTCACTTCCCAAGTTACTACAAGTTCCTTCAGACTAGCATTTTTCCACGGAAATTAGTTACATATTTCACTGTGGAAAGATTGGAATATGCATGCTGTATTTGTGCAGCTTTCCTTCGTGCCCATCGAATTGCTCGGCGACAGTTACATGACTTTATAGGTGACAGTGATGTTTCATCTATTGTCGTCAATGAAAGCGTTGTAGAAGGAGAAGAAGCAAGAAAGTTCCTAGAAGATGTTCGTGTGGCATTCCCTCAGGTTCTGCGTGTTGTGAAAACAAGGCAAGCTACATATTTAGTGCTAAATCATTTACTTGAATATGTTCAAGACCTTGAAAAGTCTGGATTATTGGAGGAGAAAGAGATGCTTCATCTTCATGATGCTGTCCAGACTGATTTAAAGAAACTACTTAGGAACCCTCCCTTGGTGAAGGTTCCTAAAATGAGTGGTGTGCATCCTATGTTGGGTGCCCTGCCATCTTCCGTCCGTGAACCACTTGCAAGCAATAGCAAGGAAATGATGAAATTGCGTGGTCTGACACTTTACAAGGAAGGCTCCAAACCAAATGGTATTTGGTTGGTTTCTAGTGGGGTTGTGAAGTGGGAAAGCAAGATAATAAGAAACAAGCATTCCTTTTACCCCACTTTTACTCATGGAAGCACATTGGGTCTATACGAAGTCCTAACTGGAAGGCCATATATCTGTGATGTGATGACAGATTCGGTGGTTCTCTGTTTTTTCCTTGAAGGTGACAAGATATTGTCGTGTCTTAAGTCAGATCCTTCAGTTGAAGACTTCCTGTGGCAGGAGAGTGCTATTTTCCTTTCCAAACTGTTGCTTCCTCAGATATTTGAAAAGATGGCAATGCAAAATTTAAGAGCTCTTGTTGCAGAAAGGTCGGTAATGACTGTATACATAAGAGGAGAAACGATAGAAATACCTCATCATTCCATTGGCATTTTACTTGAAGGATATGTTAAAACTCAAGGTCATCAAGATCTGGTAACTTCACCAGCAGCTCTTTTGCCTTCACATGGGAGTCTAAGCTCCCTAAGTTTAGAAAATTCCAGTATAAAGAATGCAAGTTTTGCTCATAAATCGTCCTCTTACATAGTTGAAACAAGGGCAAGGGCAGTCATGTTTGATATTGCGGCATTTGAAACTGATGCTGCTCTTTCTAGAAGGTCAAGTTCACTGTTGTCACACGCAGTTGATCATCCCCATAGGCCTCTAGGCAGAGAACATAGTGGTCTTATGAGTTGGCCTGAAAATTTCTTTAAGCCAAAGCAGCATAAGAAAAATTCTGAAGGTTTTGGGCAACAAACCAATAGTTTGTCTGCAAGGGCAATGCATTTGAGCATTTATGGCAGCATGGTGGAAATCCGTTTACCAAGAAGTTTGTCAAGCAATCTGCCCCGTGCCCCTCATAGTTTATCATATCCAACCATTCAATCAGATCAGGGTCGTCCACTTGTTTCTGTGAAGTCAGAAGGAGCTGCAACTTCTAAGAAGGACCCTGAGGTGAGAGAATTCACAGGGAATGTTAAAGATCCCCCAGCTCAGAGCACAGAACGAAGAGGAAGTTATGCAGACGATACGAGTGATGAATCTGGTGGTGAAGAAGATATTATAGTGAGGATTGATTCACCTAGCACGCTGTCTTTTCGCCAGGCATCTTGA 3432 0.4187 MAAVTEMLLPYRIMAEEASTSASSSEVESNPTDAVIFVGVSLALGIASRHILRGTRVPYTVALLTIGIGLGSLEYGTHHQLGKIGNGIRIWSNIDPDLLLAVFLPALLFESSFSMEIHQIKRCIVQMILLAGPGVVISTFCLGSVLKLTFPYNWSWKISLLLGGLLSATDPVAVVALLKELGASKKLSTIIEGESLMNDGTAIVVYTLFFRMVLGESFNWASIIKFLAQVSLGAVGMGLAFGIASVLWLGFIFNDTVIEITLTLAVSYIAFYTAQEGSDLSGVLTVMTLGMFYSAYARTAFKGDGQQSLHHFWEMVSYIANTLIFILSGVLIAEGILNGYNVFADGKSWANLFLLYAYVQASRCIVVGILFPFLRYFGYGLDWKEAVILIWSGLRGAVALSLSLSVKRSSGRSVELNSDTGTLFLFFTGGIVFLTLIVNGSTTQFILHFLDMDRLSAAKKRILNYTKYEMLNKALEAFGELGDDEELGPADWPTVKRYISCLNDLEGERIHPHGAPESDSTLDPMNLKDIRIRLLNGVQAAYWEMLDEGRIAQATANILMRSVEEAIDLAPLEPLCDWRGLKPNVHFPSYYKFLQTSIFPRKLVTYFTVERLEYACCICAAFLRAHRIARRQLHDFIGDSDVSSIVVNESVVEGEEARKFLEDVRVAFPQVLRVVKTRQATYLVLNHLLEYVQDLEKSGLLEEKEMLHLHDAVQTDLKKLLRNPPLVKVPKMSGVHPMLGALPSSVREPLASNSKEMMKLRGLTLYKEGSKPNGIWLVSSGVVKWESKIIRNKHSFYPTFTHGSTLGLYEVLTGRPYICDVMTDSVVLCFFLEGDKILSCLKSDPSVEDFLWQESAIFLSKLLLPQIFEKMAMQNLRALVAERSVMTVYIRGETIEIPHHSIGILLEGYVKTQGHQDLVTSPAALLPSHGSLSSLSLENSSIKNASFAHKSSSYIVETRARAVMFDIAAFETDAALSRRSSSLLSHAVDHPHRPLGREHSGLMSWPENFFKPKQHKKNSEGFGQQTNSLSARAMHLSIYGSMVEIRLPRSLSSNLPRAPHSLSYPTIQSDQGRPLVSVKSEGAATSKKDPEVREFTGNVKDPPAQSTERRGSYADDTSDESGGEEDIIVRIDSPSTLSFRQAS 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1740 1143 MobiDBLite consensus disorder prediction 1112 1127 - -
Lele50g1740 1143 MobiDBLite consensus disorder prediction 1058 1143 - -
Lele50g1740 1143 Pfam Sodium/hydrogen exchanger family 36 447 IPR006153 GO:0006812|GO:0015299|GO:0016020|GO:0055085
Lele50g1740 1143 SUPERFAMILY cAMP-binding domain-like 736 852 IPR018490 -
Lele50g1740 1143 MobiDBLite consensus disorder prediction 1058 1075 - -
Lele50g1740 1143 Gene3D Jelly Rolls 735 912 IPR014710 -
Lele50g1740 1143 FunFam Sodium/hydrogen exchanger 7 725 862 - -
Lele50g1740 1143 PANTHER SODIUM/HYDROGEN EXCHANGER 19 802 IPR018422 GO:0006812|GO:0015299|GO:0016020
Lele50g1740 1143 Gene3D - 157 207 - -
Lele50g1740 1143 ProSiteProfiles cAMP/cGMP binding motif profile. 738 833 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1740 Lele-ChrLele50 22136036 22149986 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1740 1 1141 Antiporters AT2G01980 65.026 0.0 1430
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g1740 50 22136036 22149986 Lele50g1740 50 22136036 22149986 ECH
Lele50g1740 50 22136036 22149986 Lele51g1640 51 17376016 17410131 hybridization
Lele50g1740 50 22136036 22149986 Lele52g1702 52 20561582 20575579 hybridization