Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1732 ATGCACTTCACCATGGCTCTCCCAAAACCACCGGCCCCTGATATCTCCTTCGCTTCTCACTTTGCCATCGGCTCTCTTCCCAGGCTGAACATGCCGGAGAAGGCGATGCCAAAGGAGGCGGCGTACCGGAACATTCACGACGAGCTGCAGTTCGACGCCCTTCCCAAGCTCAACTTGGCTTCGTTCGTCACCACTTCCATGGAGGAAGAATGCAACAAGCTCATCATGGAATCCATTAACAAGAACTACGTTGACATGCACGAGTACCCCATCACCACCGATCTTCACAATCGATGCGTGAACATGCTGGCGAGATTGTTCAATGCTCCGATGGAAGAAGGCGAAACTGGAGTCGGAGTGGGGACGGTTGGATCGTCGGAAGCCATAATGCTGGCGGGGCTGGCTTTCAAGAAGAGATGGCAAAACATGAGGAAGGCTCAAGGCAAGCCTTTCGACAAGCCTAACATTGTAACTGGCTCCAATGTTCAGGTGTGTTGGGAGAAGTTTGGGAGGTATTTCGAGGTGGAGCTGAAGGAGGTGAAGGTGAGGGAAGGGTACTACGTGATGGATCCGGCAAGAGCGGTGGAGATGGTGGACGAGAACACGATATGTGTGGCAGCGATTCTGGGATCTACTTACAACGGCGAATTCGAAGACGTCAAGCTCTTGAATGATCTGCTTCTCCAGAAGAACAAGCTAACAGGCTGGGAGACGCCGATTCATGTGGATGCAGCGAGTGGAGGATTCGTAGCGCCATTTTTATACCCAGATCTACAGTGGGATTTCAGGCTGCCATTGGTGAAGAGTATCAATGTGAGCGGCCACAAGTACGGTCTGGTGTATGCAGGCATTGGTTGGGTTCTTTGGAGAAGCAAACAAGACTTACCTCAAGATCTTGTCTTCCACATCAATTACCTTGGAGCTGATCAGCCTACCTTCACCCTCAATTTTTCCAAAGGTTCTAGCCAGATTATCGCCCAGTATTATCAGCTAATTCGCTTGGGCAAAGAGGGCTACCGTAATGTGATGGAGAACTGTAGAGAAAATGCAATGGTTCTAAAAGAAGGAATAGTGAACACTGGATGCTTCGACATACTTTCCAAGGACGATGGCGTTCCTGTGGTGGCATTCTCCCTCAAGGACAGAAGTCGACACAACGAGTTCAAGATCTCGGCCATGCTCCGCCGCAACGGGTGGATCGTGCCGGCATACCCGATGCCGCCCGGTGCCGAGCACATCAATGTGCTGCGCGTGGTGATAAGGGCCGAGTTCTCTCGCACTCTGGCCGAACACCTTGTGCTGGACATCACAAACGTGTTGCATGAACTTGAAATGCTTCGTCCTGGATACAACATTAATGTGAAGAATGATCAGAATAGTGATAATATTGAAGGAGTGAAGAGGACTGCGTTGGATGTCCAAAGAGAAATCATTGATCAAGAAGCTAACAAGCGCCAAAAAATCTTGGCAGCCTAG 1476 0.5034 MHFTMALPKPPAPDISFASHFAIGSLPRLNMPEKAMPKEAAYRNIHDELQFDALPKLNLASFVTTSMEEECNKLIMESINKNYVDMHEYPITTDLHNRCVNMLARLFNAPMEEGETGVGVGTVGSSEAIMLAGLAFKKRWQNMRKAQGKPFDKPNIVTGSNVQVCWEKFGRYFEVELKEVKVREGYYVMDPARAVEMVDENTICVAAILGSTYNGEFEDVKLLNDLLLQKNKLTGWETPIHVDAASGGFVAPFLYPDLQWDFRLPLVKSINVSGHKYGLVYAGIGWVLWRSKQDLPQDLVFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGKEGYRNVMENCRENAMVLKEGIVNTGCFDILSKDDGVPVVAFSLKDRSRHNEFKISAMLRRNGWIVPAYPMPPGAEHINVLRVVIRAEFSRTLAEHLVLDITNVLHELEMLRPGYNINVKNDQNSDNIEGVKRTALDVQREIIDQEANKRQKILAA 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1732 491 Pfam Pyridoxal-dependent decarboxylase conserved domain 32 380 IPR002129 GO:0016830|GO:0019752|GO:0030170
Lele50g1732 491 CDD DOPA_deC_like 58 436 - -
Lele50g1732 491 Gene3D - 11 64 - -
Lele50g1732 491 FunFam Glutamate decarboxylase 65 359 - -
Lele50g1732 491 SUPERFAMILY PLP-dependent transferases 25 443 IPR015424 -
Lele50g1732 491 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 17 443 IPR010107 GO:0004351|GO:0006536|GO:0030170
Lele50g1732 491 FunFam Glutamate decarboxylase 360 447 - -
Lele50g1732 491 PANTHER GLUTAMATE DECARBOXYLASE 15 484 IPR010107 GO:0004351|GO:0006536|GO:0030170
Lele50g1732 491 Gene3D - 65 358 IPR015421 GO:0003824
Lele50g1732 491 Gene3D - 360 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1732 Lele-ChrLele50 22087334 22090011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1732 16 478 Calmodulin-binding Proteins AT5G17330 75.267 0.0 738